MA_32670g0010


Description : component RPS16 of SSU proteome


Gene families : OG_01_0002343 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002343_tree ,
OG_02_0002210 (LandPlants) Phylogenetic Tree(s): OG_02_0002210_tree ,
OG_03_0002828 (SeedPlants) Phylogenetic Tree(s): OG_03_0002828_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_32670g0010
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00161540 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.11 Archaeplastida
AMTR_s00046p00076360 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.19 Archaeplastida
AT2G09990 No alias Ribosomal protein S5 domain 2-like superfamily protein 0.22 Archaeplastida
Cpa|evm.model.tig00000123.14 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.22 Archaeplastida
Cre13.g573351 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.29 Archaeplastida
GSVIVT01017923001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.23 Archaeplastida
Gb_05712 No alias component RPS16 of SSU proteome 0.2 Archaeplastida
LOC_Os11g03400.1 No alias component RPS16 of SSU proteome 0.11 Archaeplastida
LOC_Os12g03090.1 No alias component RPS16 of SSU proteome 0.13 Archaeplastida
Mp1g07720.1 No alias component RPS16 of SSU proteome 0.21 Archaeplastida
Mp1g14290.1 No alias component RPS16 of SSU proteome 0.28 Archaeplastida
Pp3c18_1350V3.1 No alias Ribosomal protein S5 domain 2-like superfamily protein 0.29 Archaeplastida
Pp3c19_22410V3.1 No alias Ribosomal protein S5 domain 2-like superfamily protein 0.29 Archaeplastida
Pp3c21_20630V3.1 No alias Ribosomal protein S5 domain 2-like superfamily protein 0.31 Archaeplastida
Pp3c22_21090V3.1 No alias Ribosomal protein S5 domain 2-like superfamily protein 0.3 Archaeplastida
Pp3c9_4180V3.1 No alias Ribosomal protein S5 domain 2-like superfamily protein 0.17 Archaeplastida
Smo138369 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.18 Archaeplastida
Solyc01g068530.3.1 No alias component RPS16 of SSU proteome 0.25 Archaeplastida
Solyc04g026100.1.1 No alias component RPS16 of SSU proteome 0.32 Archaeplastida
Solyc05g005690.1.1 No alias component RPS16 of SSU proteome 0.26 Archaeplastida
Zm00001e009230_P001 No alias component RPS16 of SSU proteome 0.12 Archaeplastida
Zm00001e020865_P003 No alias component RPS16 of SSU proteome 0.14 Archaeplastida
Zm00001e039245_P001 No alias component RPS16 of SSU proteome 0.04 Archaeplastida
AMTR_s00045p00161540 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.09 LandPlants
AMTR_s00046p00076360 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.17 LandPlants
AT2G09990 No alias Ribosomal protein S5 domain 2-like superfamily protein 0.21 LandPlants
GSVIVT01017923001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.19 LandPlants
Gb_05712 No alias component RPS16 of SSU proteome 0.2 LandPlants
LOC_Os11g03400.1 No alias component RPS16 of SSU proteome 0.1 LandPlants
LOC_Os12g03090.1 No alias component RPS16 of SSU proteome 0.11 LandPlants
Mp1g07720.1 No alias component RPS16 of SSU proteome 0.2 LandPlants
Mp1g14290.1 No alias component RPS16 of SSU proteome 0.27 LandPlants
Pp3c18_1350V3.1 No alias Ribosomal protein S5 domain 2-like superfamily protein 0.26 LandPlants
Pp3c19_22410V3.1 No alias Ribosomal protein S5 domain 2-like superfamily protein 0.27 LandPlants
Pp3c21_20630V3.1 No alias Ribosomal protein S5 domain 2-like superfamily protein 0.29 LandPlants
Pp3c22_21090V3.1 No alias Ribosomal protein S5 domain 2-like superfamily protein 0.27 LandPlants
Pp3c9_4180V3.1 No alias Ribosomal protein S5 domain 2-like superfamily protein 0.13 LandPlants
Smo138369 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.16 LandPlants
Solyc01g068530.3.1 No alias component RPS16 of SSU proteome 0.24 LandPlants
Solyc04g026100.1.1 No alias component RPS16 of SSU proteome 0.29 LandPlants
Solyc05g005690.1.1 No alias component RPS16 of SSU proteome 0.24 LandPlants
Zm00001e009230_P001 No alias component RPS16 of SSU proteome 0.11 LandPlants
Zm00001e020865_P003 No alias component RPS16 of SSU proteome 0.14 LandPlants
Zm00001e039245_P001 No alias component RPS16 of SSU proteome 0.04 LandPlants
AMTR_s00045p00161540 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.09 SeedPlants
AMTR_s00046p00076360 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.17 SeedPlants
AT2G09990 No alias Ribosomal protein S5 domain 2-like superfamily protein 0.21 SeedPlants
GSVIVT01017923001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.18 SeedPlants
Gb_05712 No alias component RPS16 of SSU proteome 0.2 SeedPlants
LOC_Os11g03400.1 No alias component RPS16 of SSU proteome 0.1 SeedPlants
LOC_Os12g03090.1 No alias component RPS16 of SSU proteome 0.11 SeedPlants
Solyc01g068530.3.1 No alias component RPS16 of SSU proteome 0.24 SeedPlants
Solyc04g026100.1.1 No alias component RPS16 of SSU proteome 0.28 SeedPlants
Solyc05g005690.1.1 No alias component RPS16 of SSU proteome 0.24 SeedPlants
Zm00001e009230_P001 No alias component RPS16 of SSU proteome 0.11 SeedPlants
Zm00001e020865_P003 No alias component RPS16 of SSU proteome 0.14 SeedPlants
Zm00001e039245_P001 No alias component RPS16 of SSU proteome 0.04 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000754 Ribosomal_S9 11 143
No external refs found!