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  5. Nbi_g02248

Nbi_g02248


Description : not classified & original description: none


Gene families : OG0013786 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0013786_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g02248
Cluster HCCA: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
Aop_g14447 No alias regulatory protein of RNA homeostasis & original... 0.01 OrthoFinder output from all 39 species
Pir_g05281 No alias not classified & original description: none 0.02 OrthoFinder output from all 39 species
Spa_g15252 No alias not classified & original description: none 0.02 OrthoFinder output from all 39 species
Spa_g49690 No alias not classified & original description: none 0.02 OrthoFinder output from all 39 species
Tin_g11119 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0007186 G protein-coupled receptor signaling pathway IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 233 259
IPR000571 Znf_CCCH 119 143
IPR041367 Znf-CCCH_4 182 203
No external refs found!