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  5. Nbi_g02171

Nbi_g02171 (VFB3)


Aliases : VFB3

Description : substrate adaptor *(VFB) of SCF E3 ubiquitin ligase complex & original description: none


Gene families : OG0001029 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001029_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g02171

Target Alias Description ECC score Gene Family Method Actions
Zm00001e007640_P002 VFB4, SKIP2,... component FBX of SCF E3 ubiquitin ligase complex 0.03 OrthoFinder output from all 47 species
Zm00001e041189_P001 VFB4, SKIP2,... component FBX of SCF E3 ubiquitin ligase complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000012 single strand break repair IEP HCCA
MF GO:0003684 damaged DNA binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR041567 COI1_F-box 30 67
No external refs found!