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  5. Nbi_g02082

Nbi_g02082 (AUD1, UXS2, ATUXS2)


Aliases : AUD1, UXS2, ATUXS2

Description : EC_4.1 carbon-carbon lyase & original description: none


Gene families : OG0000934 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000934_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g02082

Target Alias Description ECC score Gene Family Method Actions
AT2G28760 UXS6 UDP-XYL synthase 6 0.03 OrthoFinder output from all 47 species
AT2G47650 UXS4 UDP-xylose synthase 4 0.02 OrthoFinder output from all 47 species
AT3G53520 UXS1, ATUXS1 UDP-glucuronic acid decarboxylase 1 0.03 OrthoFinder output from all 47 species
AT5G59290 ATUXS3, UXS3 UDP-glucuronic acid decarboxylase 3 0.03 OrthoFinder output from all 47 species
Aev_g02095 AUD1, UXS2, ATUXS2 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g00514 UXS6 EC_4.1 carbon-carbon lyase & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.35G050200.1 AUD1, UXS2,... EC_4.1 carbon-carbon lyase & original description:... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000718.35 AUD1, UXS2, ATUXS2 Carbohydrate metabolism.nucleotide sugar... 0.02 OrthoFinder output from all 47 species
Gb_01545 UXS5 UDP-D-glucuronic acid decarboxylase 0.04 OrthoFinder output from all 47 species
Gb_12900 AUD1, UXS2, ATUXS2 UDP-D-glucuronic acid decarboxylase 0.03 OrthoFinder output from all 47 species
LOC_Os01g62020.1 AUD1, UXS2,... UDP-D-glucuronic acid decarboxylase 0.04 OrthoFinder output from all 47 species
LOC_Os03g16980.1 UXS6, LOC_Os03g16980 UDP-D-glucuronic acid decarboxylase 0.03 OrthoFinder output from all 47 species
LOC_Os05g29990.1 AUD1, UXS2,... UDP-D-glucuronic acid decarboxylase 0.04 OrthoFinder output from all 47 species
Mp2g19470.1 UXS5 UDP-D-glucuronic acid decarboxylase 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0026.g009542 AUD1, UXS2, ATUXS2 EC_4.1 carbon-carbon lyase & original description: CDS=1-1377 0.03 OrthoFinder output from all 47 species
Smo267191 AUD1, UXS2, ATUXS2 Carbohydrate metabolism.nucleotide sugar... 0.04 OrthoFinder output from all 47 species
Spa_g10354 UXS6 EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12500 AUD1, UXS2, ATUXS2 EC_4.1 carbon-carbon lyase & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e001241_P001 UXS5, Zm00001e001241 UDP-D-glucuronic acid decarboxylase 0.04 OrthoFinder output from all 47 species
Zm00001e028786_P001 AUD1, UXS2,... UDP-D-glucuronic acid decarboxylase 0.04 OrthoFinder output from all 47 species
Zm00001e038475_P001 UXS6, Zm00001e038475 UDP-D-glucuronic acid decarboxylase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0008199 ferric iron binding IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR016040 NAD(P)-bd_dom 116 409
No external refs found!