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Nbi_g01860 (SMT1, CPH)


Aliases : SMT1, CPH

Description : EC_2.1 transferase transferring one-carbon group & original description: none


Gene families : OG0000656 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000656_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g01860
Cluster HCCA: Cluster_174

Target Alias Description ECC score Gene Family Method Actions
Aop_g68433 SMT1, CPH EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Ceric.05G018800.1 SMT1, CPH,... EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Dcu_g15834 SMT1, CPH EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
LOC_Os03g59290.1 SMT1, CPH, LOC_Os03g59290 sterol C-24 methyltransferase 0.02 OrthoFinder output from all 47 species
Pir_g08673 SMT1, CPH EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Ppi_g13815 SMT1, CPH EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Ppi_g58532 SMT1, CPH EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0004089 carbonate dehydratase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR013705 Sterol_MeTrfase_C 283 344
IPR013216 Methyltransf_11 108 204
No external refs found!