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  5. Nbi_g01831

Nbi_g01831


Description : DNA exonuclease *(NEN) & original description: none


Gene families : OG0003937 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003937_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g01831

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00268040 evm_27.TU.AmTr_v1... Protein NEN1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT4G39810 No alias Polynucleotidyl transferase, ribonuclease H-like... 0.04 OrthoFinder output from all 47 species
Aop_g08622 No alias DNA exonuclease *(NEN) & original description: none 0.12 OrthoFinder output from all 47 species
Ceric.32G067400.1 Ceric.32G067400 DNA exonuclease *(NEN) & original description:... 0.12 OrthoFinder output from all 47 species
Ceric.33G052600.1 Ceric.33G052600 DNA exonuclease *(NEN) & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g14200 No alias DNA exonuclease *(NEN) & original description: none 0.12 OrthoFinder output from all 47 species
GSVIVT01022160001 No alias Protein NEN4 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Len_g16196 No alias DNA exonuclease *(NEN) & original description: none 0.17 OrthoFinder output from all 47 species
Lfl_g19210 No alias DNA exonuclease *(NEN) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g42214 No alias DNA exonuclease *(NEN) & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g25166 No alias DNA exonuclease *(NEN) & original description: none 0.07 OrthoFinder output from all 47 species
Solyc04g054720.4.1 Solyc04g054720 Protein NEN4 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Solyc12g036220.3.1 Solyc12g036220 Protein NEN1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g04824 No alias DNA exonuclease *(NEN) & original description: none 0.14 OrthoFinder output from all 47 species
Zm00001e027681_P001 Zm00001e027681 Protein NEN2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
MF GO:0015267 channel activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR013520 Exonuclease_RNaseT/DNA_pol3 78 237
No external refs found!