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  5. Nbi_g01728

Nbi_g01728


Description : component *(NdhN) of NDH subcomplex A & original description: none


Gene families : OG0008641 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008641_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g01728
Cluster HCCA: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
AT5G58260 No alias oxidoreductases, acting on NADH or NADPH, quinone or... 0.03 OrthoFinder output from all 47 species
Aev_g00609 No alias component *(NdhN) of NDH subcomplex A & original... 0.04 OrthoFinder output from all 47 species
Ala_g04294 No alias component *(NdhN) of NDH subcomplex A & original... 0.04 OrthoFinder output from all 47 species
Aob_g01253 No alias component *(NdhN) of NDH subcomplex A & original... 0.03 OrthoFinder output from all 47 species
Aop_g18163 No alias component *(NdhN) of NDH subcomplex A & original... 0.09 OrthoFinder output from all 47 species
Aspi01Gene60231.t1 Aspi01Gene60231 component *(NdhN) of NDH subcomplex A & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0178.g056220 No alias component *(NdhN) of NDH subcomplex A & original... 0.07 OrthoFinder output from all 47 species
Cba_g07302 No alias component *(NdhN) of NDH subcomplex A & original... 0.05 OrthoFinder output from all 47 species
Ceric.39G019700.1 Ceric.39G019700 component *(NdhN) of NDH subcomplex A & original... 0.06 OrthoFinder output from all 47 species
Dac_g08813 No alias component *(NdhN) of NDH subcomplex A & original... 0.04 OrthoFinder output from all 47 species
Dde_g12638 No alias component *(NdhN) of NDH subcomplex A & original... 0.04 OrthoFinder output from all 47 species
Ehy_g02118 No alias component *(NdhN) of NDH subcomplex A & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01024526001 No alias Photosynthesis.photophosphorylation.chlororespiration.NAD... 0.08 OrthoFinder output from all 47 species
LOC_Os01g66000.1 LOC_Os01g66000 component NdhN of NDH subcomplex A 0.03 OrthoFinder output from all 47 species
Len_g00435 No alias component *(NdhN) of NDH subcomplex A & original... 0.04 OrthoFinder output from all 47 species
Mp5g18600.1 No alias component NdhN of NDH subcomplex A 0.05 OrthoFinder output from all 47 species
Msp_g12290 No alias component *(NdhN) of NDH subcomplex A & original... 0.05 OrthoFinder output from all 47 species
Ore_g11082 No alias component *(NdhN) of NDH subcomplex A & original... 0.03 OrthoFinder output from all 47 species
Pnu_g24872 No alias component *(NdhN) of NDH subcomplex A & original... 0.02 OrthoFinder output from all 47 species
Ppi_g16114 No alias component *(NdhN) of NDH subcomplex A & original... 0.05 OrthoFinder output from all 47 species
Sam_g23935 No alias component *(NdhN) of NDH subcomplex A & original... 0.02 OrthoFinder output from all 47 species
Spa_g00662 No alias component *(NdhN) of NDH subcomplex A & original... 0.04 OrthoFinder output from all 47 species
Tin_g04410 No alias component *(NdhN) of NDH subcomplex A & original... 0.02 OrthoFinder output from all 47 species
Zm00001e019059_P001 Zm00001e019059 component NdhN of NDH subcomplex A 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004820 glycine-tRNA ligase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006426 glycyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR020874 NAD(P)H-quinone_OxRdtase_su_N 115 252
No external refs found!