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  5. MA_311439g0010

MA_311439g0010


Description : cyclin (CYCB)


Gene families : OG_01_0000492 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000492_tree ,
OG_02_0000357 (LandPlants) Phylogenetic Tree(s): OG_02_0000357_tree ,
OG_03_0000555 (SeedPlants) Phylogenetic Tree(s): OG_03_0000555_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_311439g0010
Cluster HCCA: Cluster_540

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00032080 evm_27.TU.AmTr_v1... Cell cycle.regulation.cyclins.CYCB-type cyclin 0.07 Archaeplastida
AMTR_s00101p00131830 evm_27.TU.AmTr_v1... Cell cycle.regulation.cyclins.CYCB-type cyclin 0.07 Archaeplastida
AT1G16330 CYCB3;1 cyclin b3;1 0.03 Archaeplastida
AT1G20610 CYCB2;3 Cyclin B2;3 0.05 Archaeplastida
AT1G76310 CYCB2;4 CYCLIN B2;4 0.08 Archaeplastida
AT2G17620 CYCB2;1 Cyclin B2;1 0.04 Archaeplastida
AT2G26760 CYCB1;4 Cyclin B1;4 0.03 Archaeplastida
AT3G11520 CYCB1;3, CYC2 CYCLIN B1;3 0.05 Archaeplastida
AT4G35620 CYCB2;2 Cyclin B2;2 0.07 Archaeplastida
AT5G06150 CYCB1;2, CYC1BAT Cyclin family protein 0.04 Archaeplastida
Cpa|evm.model.tig00000769.38 No alias Cell cycle.regulation.cyclins.CYCB-type cyclin 0.05 Archaeplastida
Cre08.g370401 No alias Cyclin-B2-2 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01009895001 No alias Cell cycle.regulation.cyclins.CYCB-type cyclin 0.12 Archaeplastida
GSVIVT01025781001 No alias Cell cycle.regulation.cyclins.CYCB-type cyclin 0.11 Archaeplastida
GSVIVT01032782001 No alias Cell cycle.regulation.cyclins.CYCB-type cyclin 0.09 Archaeplastida
GSVIVT01036739001 No alias Cell cycle.regulation.cyclins.CYCB-type cyclin 0.07 Archaeplastida
Gb_01761 No alias cyclin (CYCB) 0.14 Archaeplastida
Gb_03506 No alias cyclin (CYCB) 0.09 Archaeplastida
Gb_10664 No alias cyclin (CYCB) 0.15 Archaeplastida
Gb_27795 No alias G2/mitotic-specific cyclin-1 OS=Antirrhinum majus... 0.11 Archaeplastida
LOC_Os01g59120.1 No alias cyclin (CYCB) 0.11 Archaeplastida
LOC_Os04g47580.1 No alias cyclin (CYCB) 0.05 Archaeplastida
LOC_Os05g41390.1 No alias cyclin (CYCB) 0.13 Archaeplastida
LOC_Os06g51110.2 No alias cyclin (CYCB) 0.07 Archaeplastida
MA_10393012g0020 No alias G2/mitotic-specific cyclin-2 OS=Antirrhinum majus... 0.03 Archaeplastida
MA_127335g0010 No alias cyclin (CYCB) 0.03 Archaeplastida
Mp2g00590.1 No alias cyclin (CYCB) 0.04 Archaeplastida
Mp5g10030.1 No alias cyclin (CYCB) 0.11 Archaeplastida
Pp3c15_21520V3.1 No alias CYCLIN B2;4 0.09 Archaeplastida
Pp3c9_18910V3.1 No alias CYCLIN B2;4 0.07 Archaeplastida
Smo230742 No alias Cell cycle.regulation.cyclins.CYCB-type cyclin 0.05 Archaeplastida
Solyc01g009040.4.1 No alias cyclin (CYCB) 0.03 Archaeplastida
Solyc02g082820.3.1 No alias cyclin (CYCB) 0.04 Archaeplastida
Solyc03g032190.3.1 No alias cyclin (CYCB) 0.04 Archaeplastida
Solyc04g081660.3.1 No alias Cyclin-B2-4 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc04g082430.3.1 No alias cyclin (CYCB) 0.03 Archaeplastida
Solyc07g066660.4.1 No alias cyclin (CYCB) 0.04 Archaeplastida
Solyc10g078330.2.1 No alias cyclin (CYCB) 0.02 Archaeplastida
Zm00001e007244_P001 No alias cyclin (CYCB) 0.08 Archaeplastida
Zm00001e019528_P002 No alias cyclin (CYCB) 0.06 Archaeplastida
Zm00001e025467_P001 No alias Cyclin-B1-3 OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
Zm00001e027336_P001 No alias cyclin (CYCB) 0.02 Archaeplastida
Zm00001e028899_P002 No alias cyclin (CYCB) 0.09 Archaeplastida
Zm00001e030146_P001 No alias cyclin (CYCB) 0.06 Archaeplastida
Zm00001e041485_P001 No alias cyclin (CYCB) 0.09 Archaeplastida
AMTR_s00001p00032080 evm_27.TU.AmTr_v1... Cell cycle.regulation.cyclins.CYCB-type cyclin 0.08 LandPlants
AMTR_s00101p00131830 evm_27.TU.AmTr_v1... Cell cycle.regulation.cyclins.CYCB-type cyclin 0.05 LandPlants
AT1G20610 CYCB2;3 Cyclin B2;3 0.05 LandPlants
AT1G76310 CYCB2;4 CYCLIN B2;4 0.07 LandPlants
AT2G17620 CYCB2;1 Cyclin B2;1 0.03 LandPlants
AT2G26760 CYCB1;4 Cyclin B1;4 0.03 LandPlants
AT3G11520 CYCB1;3, CYC2 CYCLIN B1;3 0.04 LandPlants
AT4G35620 CYCB2;2 Cyclin B2;2 0.06 LandPlants
AT5G06150 CYCB1;2, CYC1BAT Cyclin family protein 0.04 LandPlants
GSVIVT01009895001 No alias Cell cycle.regulation.cyclins.CYCB-type cyclin 0.12 LandPlants
GSVIVT01025781001 No alias Cell cycle.regulation.cyclins.CYCB-type cyclin 0.11 LandPlants
GSVIVT01032782001 No alias Cell cycle.regulation.cyclins.CYCB-type cyclin 0.08 LandPlants
GSVIVT01036739001 No alias Cell cycle.regulation.cyclins.CYCB-type cyclin 0.05 LandPlants
Gb_01761 No alias cyclin (CYCB) 0.13 LandPlants
Gb_03506 No alias cyclin (CYCB) 0.08 LandPlants
Gb_10664 No alias cyclin (CYCB) 0.13 LandPlants
Gb_27795 No alias G2/mitotic-specific cyclin-1 OS=Antirrhinum majus... 0.11 LandPlants
LOC_Os01g59120.1 No alias cyclin (CYCB) 0.09 LandPlants
LOC_Os04g47580.1 No alias cyclin (CYCB) 0.04 LandPlants
LOC_Os05g41390.1 No alias cyclin (CYCB) 0.1 LandPlants
LOC_Os06g51110.2 No alias cyclin (CYCB) 0.06 LandPlants
Mp2g00590.1 No alias cyclin (CYCB) 0.02 LandPlants
Mp5g10030.1 No alias cyclin (CYCB) 0.09 LandPlants
Pp3c15_21520V3.1 No alias CYCLIN B2;4 0.07 LandPlants
Pp3c9_18910V3.1 No alias CYCLIN B2;4 0.05 LandPlants
Smo230742 No alias Cell cycle.regulation.cyclins.CYCB-type cyclin 0.05 LandPlants
Solyc01g009040.4.1 No alias cyclin (CYCB) 0.03 LandPlants
Solyc02g082820.3.1 No alias cyclin (CYCB) 0.03 LandPlants
Solyc03g032190.3.1 No alias cyclin (CYCB) 0.04 LandPlants
Solyc04g081660.3.1 No alias Cyclin-B2-4 OS=Arabidopsis thaliana... 0.03 LandPlants
Solyc04g082430.3.1 No alias cyclin (CYCB) 0.02 LandPlants
Solyc07g066660.4.1 No alias cyclin (CYCB) 0.04 LandPlants
Solyc10g078330.2.1 No alias cyclin (CYCB) 0.02 LandPlants
Zm00001e007244_P001 No alias cyclin (CYCB) 0.07 LandPlants
Zm00001e019528_P002 No alias cyclin (CYCB) 0.06 LandPlants
Zm00001e025467_P001 No alias Cyclin-B1-3 OS=Oryza sativa subsp. japonica... 0.05 LandPlants
Zm00001e027336_P001 No alias cyclin (CYCB) 0.02 LandPlants
Zm00001e028899_P002 No alias cyclin (CYCB) 0.07 LandPlants
Zm00001e030146_P001 No alias cyclin (CYCB) 0.05 LandPlants
Zm00001e041485_P001 No alias cyclin (CYCB) 0.09 LandPlants
AMTR_s00101p00131830 evm_27.TU.AmTr_v1... Cell cycle.regulation.cyclins.CYCB-type cyclin 0.05 SeedPlants
AT1G16330 CYCB3;1 cyclin b3;1 0.01 SeedPlants
AT2G26760 CYCB1;4 Cyclin B1;4 0.04 SeedPlants
AT3G11520 CYCB1;3, CYC2 CYCLIN B1;3 0.05 SeedPlants
AT5G06150 CYCB1;2, CYC1BAT Cyclin family protein 0.04 SeedPlants
GSVIVT01025781001 No alias Cell cycle.regulation.cyclins.CYCB-type cyclin 0.12 SeedPlants
GSVIVT01032782001 No alias Cell cycle.regulation.cyclins.CYCB-type cyclin 0.09 SeedPlants
Gb_03506 No alias cyclin (CYCB) 0.08 SeedPlants
Gb_27795 No alias G2/mitotic-specific cyclin-1 OS=Antirrhinum majus... 0.11 SeedPlants
LOC_Os01g59120.1 No alias cyclin (CYCB) 0.1 SeedPlants
LOC_Os05g41390.1 No alias cyclin (CYCB) 0.11 SeedPlants
MA_84856g0010 No alias Cyclin-B1-2 OS=Arabidopsis thaliana... 0.03 SeedPlants
Solyc01g009040.4.1 No alias cyclin (CYCB) 0.04 SeedPlants
Solyc06g073610.3.1 No alias cyclin (CYCB) 0.01 SeedPlants
Solyc07g066660.4.1 No alias cyclin (CYCB) 0.04 SeedPlants
Solyc10g078330.2.1 No alias cyclin (CYCB) 0.03 SeedPlants
Solyc10g080950.2.1 No alias cyclin (CYCB) 0.02 SeedPlants
Zm00001e019528_P002 No alias cyclin (CYCB) 0.07 SeedPlants
Zm00001e025467_P001 No alias Cyclin-B1-3 OS=Oryza sativa subsp. japonica... 0.03 SeedPlants
Zm00001e027336_P001 No alias cyclin (CYCB) 0.02 SeedPlants
Zm00001e028899_P002 No alias cyclin (CYCB) 0.07 SeedPlants

Type GO Term Name Evidence Source
CC GO:0042025 host cell nucleus IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006671 Cyclin_N 251 377
IPR004367 Cyclin_C-dom 379 495
IPR004367 Cyclin_C-dom 65 162
No external refs found!