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  5. Nbi_g01587

Nbi_g01587


Description : component *(SWIB) of SWI-B chromatin-remodeling complexes & original description: none


Gene families : OG0001482 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001482_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g01587

Target Alias Description ECC score Gene Family Method Actions
AT2G14880 No alias SWIB/MDM2 domain superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G34290 No alias SWIB/MDM2 domain superfamily protein 0.02 OrthoFinder output from all 47 species
Als_g12934 No alias component *(SWIB) of SWI-B chromatin-remodeling... 0.04 OrthoFinder output from all 47 species
Ceric.28G033100.1 Ceric.28G033100 component *(SWIB) of SWI-B chromatin-remodeling... 0.04 OrthoFinder output from all 47 species
Dde_g00133 No alias component *(SWIB) of SWI-B chromatin-remodeling... 0.03 OrthoFinder output from all 47 species
Ehy_g04288 No alias component *(SWIB) of SWI-B chromatin-remodeling... 0.04 OrthoFinder output from all 47 species
GSVIVT01037881001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_09376 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g21936 No alias component *(SWIB) of SWI-B chromatin-remodeling... 0.05 OrthoFinder output from all 47 species
Ppi_g01763 No alias component *(SWIB) of SWI-B chromatin-remodeling... 0.03 OrthoFinder output from all 47 species
Spa_g12782 No alias component *(SWIB) of SWI-B chromatin-remodeling... 0.07 OrthoFinder output from all 47 species
Spa_g30391 No alias component *(SWIB) of SWI-B chromatin-remodeling... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035596 methylthiotransferase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0050497 alkylthioltransferase activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR003121 SWIB_MDM2_domain 65 137
No external refs found!