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  5. Nbi_g01552

Nbi_g01552


Description : not classified & original description: none


Gene families : OG0000078 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0000078_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g01552

Target Alias Description ECC score Gene Family Method Actions
AT2G37170 PIP2B, PIP2;2 plasma membrane intrinsic protein 2 0.01 OrthoFinder output from all 39 species
Cba_g25058 PIP3B, PIP2;8 plasma membrane intrinsic protein *(PIP) & original... 0.01 OrthoFinder output from all 39 species
Dcu_g21582 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Msp_g12819 PIP3B, PIP2;8 plasma membrane intrinsic protein *(PIP) & original... 0.02 OrthoFinder output from all 39 species
Msp_g47455 PIP3B, PIP2;8 plasma membrane intrinsic protein *(PIP) & original... 0.01 OrthoFinder output from all 39 species
Ore_g16159 PIP3B, PIP2;8 plasma membrane intrinsic protein *(PIP) & original... 0.01 OrthoFinder output from all 39 species
Ppi_g16840 PIP3B, PIP2;8 plasma membrane intrinsic protein *(PIP) & original... 0.01 OrthoFinder output from all 39 species
Ppi_g54349 PIP2;1, PIP2, PIP2A plasma membrane intrinsic protein *(PIP) & original... 0.01 OrthoFinder output from all 39 species
Sacu_v1.1_s0006.g002971 PIP2;1, PIP2, PIP2A plasma membrane intrinsic protein *(PIP) & original... 0.01 OrthoFinder output from all 39 species
Spa_g56925 PIP2;1, PIP2, PIP2A plasma membrane intrinsic protein *(PIP) & original... 0.02 OrthoFinder output from all 39 species
Spa_g56926 PIP2;1, PIP2, PIP2A plasma membrane intrinsic protein *(PIP) & original... 0.02 OrthoFinder output from all 39 species
Tin_g21694 PIP2;1, PIP2, PIP2A plasma membrane intrinsic protein *(PIP) & original... 0.02 OrthoFinder output from all 39 species
Tin_g24068 PIP2;1, PIP2, PIP2A plasma membrane intrinsic protein *(PIP) & original... 0.01 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0004126 cytidine deaminase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006213 pyrimidine nucleoside metabolic process IEP HCCA
BP GO:0006216 cytidine catabolic process IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0009116 nucleoside metabolic process IEP HCCA
BP GO:0009119 ribonucleoside metabolic process IEP HCCA
BP GO:0009164 nucleoside catabolic process IEP HCCA
BP GO:0009972 cytidine deamination IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP HCCA
MF GO:0019239 deaminase activity IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0034656 nucleobase-containing small molecule catabolic process IEP HCCA
BP GO:0042454 ribonucleoside catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046087 cytidine metabolic process IEP HCCA
BP GO:0046131 pyrimidine ribonucleoside metabolic process IEP HCCA
BP GO:0046133 pyrimidine ribonucleoside catabolic process IEP HCCA
BP GO:0046135 pyrimidine nucleoside catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072529 pyrimidine-containing compound catabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901657 glycosyl compound metabolic process IEP HCCA
BP GO:1901658 glycosyl compound catabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!