Nbi_g01470 (SDE1, RDR6, SGS2)

Aliases : SDE1, RDR6, SGS2

Description : ssRNA polymerase *(RDR6) & original description: none

Gene families : OG0001039 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001039_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Nbi_g01470

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00078p00056260	SDE1, RDR6,...	RNA biosynthesis.siRNA biogenesis.RDR6 ssRNA polymerase	0.03	OrthoFinder output from all 47 species
Adi_g008879	ATRDRP1, RDR1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene17564.t1	SDE1, RDR6,...	ssRNA polymerase *(RDR6) & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g14760	SDE1, RDR6, SGS2	ssRNA polymerase *(RDR6) & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.14G029700.1	SDE1, RDR6,...	ssRNA polymerase *(RDR6) & original description:...	0.05	OrthoFinder output from all 47 species
Ehy_g07935	SDE1, RDR6, SGS2	ssRNA polymerase *(RDR6) & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g14066	ATRDRP1, RDR1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Len_g14350	SDE1, RDR6, SGS2	ssRNA polymerase *(RDR6) & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g17422	SDE1, RDR6, SGS2	ssRNA polymerase *(RDR6) & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g01395	SDE1, RDR6, SGS2	ssRNA polymerase *(RDR6) & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003968	RNA-dependent RNA polymerase activity	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016779	nucleotidyltransferase activity	None	Extended
MF	GO:0034062	5'-3' RNA polymerase activity	None	Extended
MF	GO:0097747	RNA polymerase activity	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR007855	RNA-dep_RNA_pol_euk-typ	409	987

External Links

No external refs found!