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  5. Nbi_g01199

Nbi_g01199


Description : GTPase effector *(BDR) & original description: none


Gene families : OG0000666 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000666_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g01199
Cluster HCCA: Cluster_184

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00133p00115060 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G75160 No alias Protein of unknown function (DUF620) 0.03 OrthoFinder output from all 47 species
AT1G79420 No alias Protein of unknown function (DUF620) 0.04 OrthoFinder output from all 47 species
AT5G06610 No alias Protein of unknown function (DUF620) 0.04 OrthoFinder output from all 47 species
Aev_g37858 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g10609 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03158 No alias GTPase effector *(BDR) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g15973 No alias GTPase effector *(BDR) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g00596 No alias GTPase effector *(BDR) & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g03174 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0031.g024486 No alias GTPase effector *(BDR) & original description: CDS=183-1394 0.04 OrthoFinder output from all 47 species
Cba_g17398 No alias GTPase effector *(BDR) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g03751 No alias GTPase effector *(BDR) & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g14931 No alias GTPase effector *(BDR) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g37138 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g10535 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01009382001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01016395001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01033432001 No alias Chromatin organisation.histone modifications.histone... 0.02 OrthoFinder output from all 47 species
GSVIVT01036716001 No alias No description available 0.06 OrthoFinder output from all 47 species
GSVIVT01037884001 No alias No description available 0.04 OrthoFinder output from all 47 species
LOC_Os10g27110.1 LOC_Os10g27110 GTPase effector (BDR) 0.03 OrthoFinder output from all 47 species
LOC_Os12g39160.1 LOC_Os12g39160 GTPase effector (BDR) 0.03 OrthoFinder output from all 47 species
Len_g17331 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Mp7g18900.1 No alias GTPase effector (BDR) 0.02 OrthoFinder output from all 47 species
Ppi_g05810 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g12477 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g12478 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g085490.2.1 Solyc02g085490 GTPase effector (BDR) 0.02 OrthoFinder output from all 47 species
Spa_g01533 No alias GTPase effector *(BDR) & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g03708 No alias GTPase effector *(BDR) & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g09050 No alias GTPase effector *(BDR) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14827 No alias GTPase effector *(BDR) & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g55614 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001181_P001 Zm00001e001181 GTPase effector (BDR) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR006873 DUF620 150 393
No external refs found!