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  5. Nbi_g01191

Nbi_g01191


Description : psbJ/psbN-translation activator *(LPE1) & original description: none


Gene families : OG0007915 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007915_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g01191

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00149530 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g46610... 0.02 OrthoFinder output from all 47 species
AT3G46610 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.04 OrthoFinder output from all 47 species
Aop_g06985 No alias psbJ/psbN-translation activator *(LPE1) & original... 0.03 OrthoFinder output from all 47 species
Len_g46359 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Solyc02g093620.2.1 Solyc02g093620 psbJ/psbN-translation activator (LPE1) 0.02 OrthoFinder output from all 47 species
Tin_g08845 No alias psbJ/psbN-translation activator *(LPE1) & original... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 190 245
IPR002885 Pentatricopeptide_repeat 540 586
IPR033443 PPR_long 368 533
No external refs found!