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  5. Nbi_g01174

Nbi_g01174 (GTE4)


Aliases : GTE4

Description : transcriptional co-activator *(BET/GTE) & original description: none


Gene families : OG0000177 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000177_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g01174

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00091p00146570 GTE3,... Transcription factor GTE3, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G06230 GTE4 global transcription factor group E4 0.03 OrthoFinder output from all 47 species
AT3G52280 GTE6 general transcription factor group E6 0.02 OrthoFinder output from all 47 species
Adi_g074260 GTE3 transcriptional co-activator *(BET/GTE) & original... 0.02 OrthoFinder output from all 47 species
Adi_g112451 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g15387 GTE3 transcriptional co-activator *(BET/GTE) & original... 0.03 OrthoFinder output from all 47 species
Aob_g05921 GTE4 transcriptional co-activator *(BET/GTE) & original... 0.02 OrthoFinder output from all 47 species
Aob_g09032 BET9, ATBET9 transcriptional co-activator *(BET/GTE) & original... 0.04 OrthoFinder output from all 47 species
Aop_g00544 GTE3 transcriptional co-activator *(BET/GTE) & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0007.g010983 GTE3 transcriptional co-activator *(BET/GTE) & original... 0.03 OrthoFinder output from all 47 species
Cre01.g048900 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre08.g367300 BET9, ATBET9 Transcription factor GTE3, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dac_g02788 GTE1, GTE01, IMB1 transcriptional co-activator *(BET/GTE) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g08190 GTE4 transcriptional co-activator *(BET/GTE) & original... 0.03 OrthoFinder output from all 47 species
Dde_g43577 GTE6 transcriptional co-activator *(BET/GTE) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g31224 GTE4 mTERF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os04g53170.1 GTE7, LOC_Os04g53170 transcriptional co-activator (BET/GTE) 0.02 OrthoFinder output from all 47 species
Len_g17766 GTE3 transcriptional co-activator *(BET/GTE) & original... 0.04 OrthoFinder output from all 47 species
Lfl_g28735 BET9, ATBET9 transcriptional co-activator *(BET/GTE) & original... 0.02 OrthoFinder output from all 47 species
Mp5g24260.1 GTE6 transcriptional co-activator (BET/GTE) 0.02 OrthoFinder output from all 47 species
Pir_g04263 BET9, ATBET9 transcriptional co-activator *(BET/GTE) & original... 0.05 OrthoFinder output from all 47 species
Pir_g19514 GTE4 transcriptional co-activator *(BET/GTE) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g05213 NPX1 transcriptional co-activator *(BET/GTE) & original... 0.03 OrthoFinder output from all 47 species
Sam_g15796 No alias transcriptional co-activator *(BET/GTE) & original... 0.02 OrthoFinder output from all 47 species
Sam_g49069 No alias transcriptional co-activator *(BET/GTE) & original... 0.03 OrthoFinder output from all 47 species
Solyc02g091660.3.1 GTE7, Solyc02g091660 transcriptional co-activator (BET/GTE) 0.02 OrthoFinder output from all 47 species
Solyc07g062660.4.1 GTE4, Solyc07g062660 transcriptional co-activator (BET/GTE) 0.03 OrthoFinder output from all 47 species
Spa_g18573 GTE3 transcriptional co-activator *(BET/GTE) & original... 0.03 OrthoFinder output from all 47 species
Tin_g31516 GTE3 transcriptional co-activator *(BET/GTE) & original... 0.04 OrthoFinder output from all 47 species
Zm00001e009037_P001 Zm00001e009037 transcriptional co-activator (BET/GTE) 0.03 OrthoFinder output from all 47 species
Zm00001e015036_P002 NPX1, Zm00001e015036 transcriptional co-activator (BET/GTE) 0.02 OrthoFinder output from all 47 species
Zm00001e024513_P001 Zm00001e024513 transcriptional co-activator (BET/GTE) 0.03 OrthoFinder output from all 47 species
Zm00001e024861_P001 GTE4, Zm00001e024861 transcriptional co-activator (BET/GTE) 0.02 OrthoFinder output from all 47 species
Zm00001e029260_P001 BET9, ATBET9,... transcriptional co-activator (BET/GTE) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006396 RNA processing IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR001487 Bromodomain 161 245
IPR027353 NET_dom 346 408
No external refs found!