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  5. Nbi_g01147

Nbi_g01147


Description : scaffold factor *(COILIN) of Cajal body formation & original description: none


Gene families : OG0006961 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006961_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g01147

Target Alias Description ECC score Gene Family Method Actions
Cre13.g592400 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g22884 No alias scaffold factor *(COILIN) of Cajal body formation &... 0.03 OrthoFinder output from all 47 species
LOC_Os12g19040.1 LOC_Os12g19040 Coilin OS=Arabidopsis thaliana (sp|q8rwk8|coil_arath : 137.0) 0.04 OrthoFinder output from all 47 species
Sam_g16616 No alias scaffold factor *(COILIN) of Cajal body formation &... 0.02 OrthoFinder output from all 47 species
Zm00001e040792_P001 Zm00001e040792 Coilin OS=Arabidopsis thaliana (sp|q8rwk8|coil_arath : 220.0) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
MF GO:0140612 DNA damage sensor activity IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140664 ATP-dependent DNA damage sensor activity IEP HCCA
InterPro domains Description Start Stop
IPR031722 Coilin_N 19 183
No external refs found!