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  5. Nbi_g01093

Nbi_g01093


Description : not classified & original description: none


Gene families : OG0001264 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001264_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g01093
Cluster HCCA: Cluster_178

Target Alias Description ECC score Gene Family Method Actions
Adi_g056214 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g08738 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06674 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g21421 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21162 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0270.g061170 No alias not classified & original description: CDS=1-2412 0.04 OrthoFinder output from all 47 species
Cba_g09255 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g16354 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g21807 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g04773 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g21299 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g08066 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g02225 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g09351 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g09695 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g07310 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g09598 No alias PIP/PIPL precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 160 207
IPR002885 Pentatricopeptide_repeat 212 251
IPR002885 Pentatricopeptide_repeat 311 339
IPR002885 Pentatricopeptide_repeat 415 437
No external refs found!