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  5. Nbi_g00934

Nbi_g00934


Description : substrate adaptor of SCF E3 ubiquitin ligase *(AFR) & original description: none


Gene families : OG0004179 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004179_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g00934

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene45836.t1 Aspi01Gene45836 substrate adaptor of SCF E3 ubiquitin ligase *(AFR) &... 0.05 OrthoFinder output from all 47 species
Cba_g22402 No alias substrate adaptor of SCF E3 ubiquitin ligase *(AFR) &... 0.03 OrthoFinder output from all 47 species
Dde_g05267 No alias substrate adaptor of SCF E3 ubiquitin ligase *(AFR) &... 0.03 OrthoFinder output from all 47 species
LOC_Os06g44500.1 AFR, LOC_Os06g44500 F-box protein AFR OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g08178 No alias substrate adaptor of SCF E3 ubiquitin ligase *(AFR) &... 0.03 OrthoFinder output from all 47 species
Spa_g07435 No alias substrate adaptor of SCF E3 ubiquitin ligase *(AFR) &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP HCCA
MF GO:0004620 phospholipase activity IEP HCCA
MF GO:0004629 phospholipase C activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006536 glutamate metabolic process IEP HCCA
BP GO:0006537 glutamate biosynthetic process IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015930 glutamate synthase activity IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0043650 dicarboxylic acid biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 92 128
IPR006652 Kelch_1 231 277
No external refs found!