GSVIVT01028238001


Description : 30.11 signalling.light Transcription factor interacting with photoreceptors phyA and phyB. Forms a ternary complex in vitro with G-box element of the promoters of LHY, CCA1. Acts as a negative regulator of phyB signalling. It degrades rapidly after irradiation of dark grown seedlings in a process controlled by phytochromes. Does not play a significant role in controlling light input and function of the circadian clockwork. Binds to G- and E-boxes, but not to other ACEs. Binds to anthocyanin biosynthetic genes in a light- and HY5-independent fashion. PIF3 function as a transcriptional activator can be functionally and mechanistically separated from its role in repression of PhyB mediated processes. phytochrome interacting factor 3 (PIF3)


Gene families : OG_01_0000461 (Gene family) Phylogenetic Tree(s): OG0000461_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01028238001
Cluster HCCA cluster: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AT5G61270 PIF7 phytochrome-interacting factor7 0.03 Gene family
GSVIVT01018165001 No alias 27.3.6 RNA.regulation of transcription.bHLH,Basic... 0.05 Gene family
LOC_Os04g52770 Os04g0618600 No description available 0.01 Gene family
MA_167128g0010 No alias No description available 0.02 Gene family
Solyc04g078690.3.1 Solyc04g078690.3 27.3.6 RNA.regulation of transcription.bHLH,Basic... 0.02 Gene family
Solyc06g008030.3.1 Solyc06g008030.3 No description available 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011598 bHLH_dom 19 64
No external refs found!