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  5. Nbi_g00616

Nbi_g00616


Description : not classified & original description: none


Gene families : OG0001941 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001941_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g00616
Cluster HCCA: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
Als_g10479 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g25349 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Azfi_s0018.g014787 No alias not classified & original description: CDS=73-369 0.03 OrthoFinder output from all 47 species
Ceric.13G075900.1 Ceric.13G075900 not classified & original description: pacid=50635895... 0.05 OrthoFinder output from all 47 species
Dac_g27435 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g14284 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g25155 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c1_33030V3.1 Pp3c1_33030 No annotation 0.01 OrthoFinder output from all 47 species
Sam_g09967 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g09968 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g24775 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Tin_g22383 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004751 ribose-5-phosphate isomerase activity IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR018392 LysM_dom 164 206
No external refs found!