GSVIVT01028079001

Description : 29.3.1 protein.targeting.nucleus Protein interacts with Agrobacterium proteins VirD2 and VirE2. Is not individually essential for Agrobacterium-mediated root transformation, but when overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype. importin alpha isoform 2 (IMPA-2)

Gene families : OG_01_0000716 (Gene family) Phylogenetic Tree(s): OG0000716_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR network (cutoff 100): GSVIVT01028079001
Cluster	HCCA cluster: Cluster_206

Target	Alias	Description	ECC score	Gene Family Method
AT3G06720	IMPA-1, IMPA1,...	importin alpha isoform 1	0.01	Gene family
Cpa\|evm.model.tig00021721.27	No alias	29.3.1 protein.targeting.nucleus Encodes importin alpha...	0.02	Gene family
Cre04.g215850	No alias	29.3.1 protein.targeting.nucleus Encodes importin alpha...	0.03	Gene family
LOC_Os05g06350	Os05g0155500,...	29.3.1 protein.targeting.nucleus Encodes importin alpha...	0.07	Gene family
MA_92132g0010	No alias	29.3.1 protein.targeting.nucleus Encodes importin alpha...	0.02	Gene family
Smo266556	PACid_15409102	No description available	0.06	Gene family
Solyc01g100720.3.1	Solyc01g100720.3	29.3.1 protein.targeting.nucleus Protein interacts with...	0.07	Gene family
Solyc06g009750.3.1	Solyc06g009750.3	29.3.1 protein.targeting.nucleus Encodes importin alpha...	0.04	Gene family
Zm00001d008345	GRMZM2G088231	29.3.1 protein.targeting.nucleus Protein interacts with...	0.02	Gene family
Zm00001d009850	GRMZM2G088088	29.3.1 protein.targeting.nucleus Encodes importin alpha...	0.02	Gene family

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
BP	GO:0006606	protein import into nucleus	IEA	InterProScan
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0006913	nucleocytoplasmic transport	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0015833	peptide transport	None	Extended
BP	GO:0017038	protein import	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0033365	protein localization to organelle	None	Extended
BP	GO:0034504	protein localization to nucleus	None	Extended
BP	GO:0034613	cellular protein localization	None	Extended
BP	GO:0042886	amide transport	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051169	nuclear transport	None	Extended
BP	GO:0051170	import into nucleus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
MF	GO:0061608	nuclear import signal receptor activity	IEA	InterProScan
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0072594	establishment of protein localization to organelle	None	Extended
MF	GO:0140104	molecular carrier activity	None	Extended
MF	GO:0140142	nucleocytoplasmic carrier activity	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000225	Armadillo	243	271
IPR000225	Armadillo	358	397
IPR000225	Armadillo	318	356
IPR000225	Armadillo	189	230
IPR000225	Armadillo	274	312
IPR000225	Armadillo	402	439
IPR000225	Armadillo	147	186
IPR000225	Armadillo	105	145
IPR032413	Arm_3	455	499
IPR002652	Importin-a_IBB	12	94

External Links

No external refs found!

GSVIVT01028079001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation