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  5. Nbi_g00590

Nbi_g00590


Description : RNA editing factor *(MEF14) & original description: none


Gene families : OG0003511 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003511_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g00590
Cluster HCCA: Cluster_138

Target Alias Description ECC score Gene Family Method Actions
Aop_g19177 No alias RNA editing factor *(MEF14) & original description: none 0.23 OrthoFinder output from all 47 species
Ceric.04G012700.1 Ceric.04G012700 RNA editing factor *(MEF14) & original description:... 0.04 OrthoFinder output from all 47 species
Len_g13638 No alias RNA editing factor *(MEF14) & original description: none 0.13 OrthoFinder output from all 47 species OrthoFinder output from all 47 species
Lfl_g18987 No alias RNA editing factor *(MEF14) & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g09690 No alias RNA editing factor *(MEF14) & original description: none 0.17 OrthoFinder output from all 47 species
Ppi_g24073 No alias RNA editing factor *(MEF14) & original description: none 0.11 OrthoFinder output from all 47 species
Sacu_v1.1_s0130.g022011 No alias RNA editing factor *(MEF14) & original description: CDS=51-1046 0.07 OrthoFinder output from all 47 species
Spa_g04763 No alias RNA editing factor *(MEF14) & original description: none 0.29 OrthoFinder output from all 47 species
Tin_g11065 No alias RNA ediTing factor *(MEF14) & original description: none 0.16 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005778 peroxisomal membrane IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016559 peroxisome fission IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031903 microbody membrane IEP HCCA
CC GO:0042579 microbody IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR013078 His_Pase_superF_clade-1 321 384
IPR013078 His_Pase_superF_clade-1 105 242
No external refs found!