Nbi_g00448 (PAF2)


Aliases : PAF2

Description : EC_3.4 hydrolase acting on peptide bond (peptidase) & original description: none


Gene families : OG0003925 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003925_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g00448
Cluster HCCA: Cluster_187

Target Alias Description ECC score Gene Family Method Actions
AT1G47250 PAF2 20S proteasome alpha subunit F2 0.04 OrthoFinder output from all 47 species
Adi_g006511 PAF2 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Aev_g46714 PAF2 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Ala_g10461 PAF2 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Aop_g03101 PAF2 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.04 OrthoFinder output from all 47 species
Aop_g04150 ARS5, PAF1, ATPSM30 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.09 OrthoFinder output from all 47 species
Aop_g37729 PAF2 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.04 OrthoFinder output from all 47 species
Ceric.06G076500.1 PAF2, Ceric.06G076500 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000217.21 ARS5, PAF1, ATPSM30 Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase... 0.06 OrthoFinder output from all 47 species
Cre06.g304300 PAF2 Protein degradation.26S proteasome.20S core... 0.07 OrthoFinder output from all 47 species
Dac_g31137 PAF2 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species
Gb_26474 PAF2 component alpha type-6 of 26S proteasome 0.03 OrthoFinder output from all 47 species
LOC_Os02g04100.1 ARS5, PAF1,... component alpha type-6 of 26S proteasome 0.08 OrthoFinder output from all 47 species
Len_g14069 PAF2 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.06 OrthoFinder output from all 47 species
MA_10143842g0010 PAF2 Proteasome subunit alpha type-1-B OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_713708g0010 PAF2 Proteasome subunit alpha type-1-A OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp4g13080.1 PAF2 component alpha type-6 of 26S proteasome 0.08 OrthoFinder output from all 47 species
Msp_g10369 ARS5, PAF1, ATPSM30 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.04 OrthoFinder output from all 47 species
Pir_g10641 PAF2 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.02 OrthoFinder output from all 47 species
Solyc04g080590.4.1 PAF2, Solyc04g080590 component alpha type-6 of 26S proteasome 0.03 OrthoFinder output from all 47 species
Spa_g24127 PAF2 EC_3.4 hydrolase acting on peptide bond (peptidase) &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
CC GO:0019773 proteasome core complex, alpha-subunit complex IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000313 organellar ribosome IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
CC GO:0005761 mitochondrial ribosome IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 29 214
IPR000426 Proteasome_asu_N 6 28
No external refs found!