Aliases : bZIP44, AtbZIP44
Description : bZIP class-S/SE transcription factor & original description: none
Gene families : OG0000391 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000391_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Nbi_g00389 | |
Cluster | HCCA: Cluster_148 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Aop_g08618 | bZIP44, AtbZIP44 | bZIP class-S/SE transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os02g03960.1 | bZIP44,... | transcription factor (bZIP) | 0.02 | OrthoFinder output from all 47 species | |
Ore_g06163 | AtbZIP63, BZO2H3 | bZIP class-C transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pir_g11229 | bZIP44, AtbZIP44 | bZIP class-S/SE transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g51249 | AtbZIP63, BZO2H3 | bZIP class-C transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Smo413715 | bZIP44, AtbZIP44 | RNA biosynthesis.transcriptional activation.bZIP... | 0.02 | OrthoFinder output from all 47 species | |
Solyc01g109880.3.1 | bZIP44,... | transcription factor (bZIP) | 0.02 | OrthoFinder output from all 47 species | |
Solyc02g092090.3.1 | AtbZIP7, bZIP7,... | transcription factor (bZIP) | 0.02 | OrthoFinder output from all 47 species | |
Solyc03g046440.3.1 | bZIP43,... | transcription factor (bZIP) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | IEA | Interproscan |
BP | GO:0006355 | regulation of DNA-templated transcription | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0003729 | mRNA binding | IEP | HCCA |
CC | GO:0005685 | U1 snRNP | IEP | HCCA |
BP | GO:0006376 | mRNA splice site selection | IEP | HCCA |
BP | GO:0016043 | cellular component organization | IEP | HCCA |
BP | GO:0022607 | cellular component assembly | IEP | HCCA |
BP | GO:0022618 | ribonucleoprotein complex assembly | IEP | HCCA |
CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
BP | GO:0071826 | ribonucleoprotein complex subunit organization | IEP | HCCA |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
CC | GO:0097525 | spliceosomal snRNP complex | IEP | HCCA |
CC | GO:0120114 | Sm-like protein family complex | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR004827 | bZIP | 190 | 236 |
No external refs found! |