GSVIVT01027613001


Description : 29.5.11.20 protein.degradation.ubiquitin.proteasom Encodes 20S proteasome beta subunit PBF1 (PBF1). PBF1


Gene families : OG_01_0003741 (Gene family) Phylogenetic Tree(s): OG0003741_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01027613001
Cluster HCCA cluster: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
AT3G60820 PBF1 N-terminal nucleophile aminohydrolases (Ntn hydrolases)... 0.05 Gene family
Cpa|evm.model.tig00001339.5 No alias 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.05 Gene family
Cre26.g756797 No alias 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.1 Gene family
LOC_Os08g41730 Os08g0529100 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.06 Gene family
LOC_Os09g32800 Os09g0505600 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.05 Gene family
Smo94273 PACid_15422737 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.04 Gene family
Solyc02g084920.3.1 Solyc02g084920.3 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.08 Gene family
Zm00001d006085 GRMZM5G817037 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.03 Gene family
Zm00001d021051 GRMZM2G074386 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEA InterProScan
CC GO:0005839 proteasome core complex IEA InterProScan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 13 207
No external refs found!