Description : stromal sorting factor of thylakoid membrane SRP insertion system *(STIC2) & original description: none
Gene families : OG0004403 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004403_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Nbi_g00106 | |
Cluster | HCCA: Cluster_163 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Ala_g00370 | No alias | stromal sorting factor of thylakoid membrane SRP... | 0.05 | OrthoFinder output from all 47 species | |
Cre10.g458550 | No alias | Protein translocation.chloroplast.thylakoid membrane SRP... | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g10854 | No alias | stromal sorting factor of thylakoid membrane SRP... | 0.04 | OrthoFinder output from all 47 species | |
Lfl_g00568 | No alias | stromal sorting factor of thylakoid membrane SRP... | 0.03 | OrthoFinder output from all 47 species | |
Mp2g03740.1 | No alias | stromal sorting factor of thylakoid membrane SRP... | 0.02 | OrthoFinder output from all 47 species | |
Msp_g07231 | No alias | stromal sorting factor of thylakoid membrane SRP... | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g00503 | No alias | stromal sorting factor of thylakoid membrane SRP... | 0.05 | OrthoFinder output from all 47 species | |
Sam_g27849 | No alias | stromal sorting factor of thylakoid membrane SRP... | 0.04 | OrthoFinder output from all 47 species | |
Spa_g06795 | No alias | stromal sorting factor of thylakoid membrane SRP... | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
MF | GO:0004751 | ribose-5-phosphate isomerase activity | IEP | HCCA |
BP | GO:0006091 | generation of precursor metabolites and energy | IEP | HCCA |
BP | GO:0006801 | superoxide metabolic process | IEP | HCCA |
BP | GO:0009052 | pentose-phosphate shunt, non-oxidative branch | IEP | HCCA |
CC | GO:0009521 | photosystem | IEP | HCCA |
CC | GO:0009522 | photosystem I | IEP | HCCA |
CC | GO:0009538 | photosystem I reaction center | IEP | HCCA |
BP | GO:0015979 | photosynthesis | IEP | HCCA |
MF | GO:0016853 | isomerase activity | IEP | HCCA |
MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
MF | GO:0016860 | intramolecular oxidoreductase activity | IEP | HCCA |
MF | GO:0016861 | intramolecular oxidoreductase activity, interconverting aldoses and ketoses | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0072593 | reactive oxygen species metabolic process | IEP | HCCA |
CC | GO:0098796 | membrane protein complex | IEP | HCCA |
BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR004401 | YbaB/EbfC | 77 | 162 |
No external refs found! |