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  5. Nbi_g00106

Nbi_g00106


Description : stromal sorting factor of thylakoid membrane SRP insertion system *(STIC2) & original description: none


Gene families : OG0004403 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004403_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g00106
Cluster HCCA: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
Ala_g00370 No alias stromal sorting factor of thylakoid membrane SRP... 0.05 OrthoFinder output from all 47 species
Cre10.g458550 No alias Protein translocation.chloroplast.thylakoid membrane SRP... 0.02 OrthoFinder output from all 47 species
Ehy_g10854 No alias stromal sorting factor of thylakoid membrane SRP... 0.04 OrthoFinder output from all 47 species
Lfl_g00568 No alias stromal sorting factor of thylakoid membrane SRP... 0.03 OrthoFinder output from all 47 species
Mp2g03740.1 No alias stromal sorting factor of thylakoid membrane SRP... 0.02 OrthoFinder output from all 47 species
Msp_g07231 No alias stromal sorting factor of thylakoid membrane SRP... 0.03 OrthoFinder output from all 47 species
Ppi_g00503 No alias stromal sorting factor of thylakoid membrane SRP... 0.05 OrthoFinder output from all 47 species
Sam_g27849 No alias stromal sorting factor of thylakoid membrane SRP... 0.04 OrthoFinder output from all 47 species
Spa_g06795 No alias stromal sorting factor of thylakoid membrane SRP... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004751 ribose-5-phosphate isomerase activity IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004401 YbaB/EbfC 77 162
No external refs found!