GSVIVT01027407001


Description : 27.3.22 RNA.regulation of transcription.HB,Homeobox transcription factor family encodes a putative transcription factor that


Gene families : OG_01_0000092 (Gene family) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01027407001
Cluster HCCA cluster: Cluster_124

Target Alias Description ECC score Gene Family Method Actions
AT3G61890 HB-12, ATHB-12, ATHB12 homeobox 12 0.07 Gene family
AT4G36740 ATHB40, HB40, HB-5 homeobox protein 40 0.03 Gene family
AT5G53980 ATHB52, HB52 homeobox protein 52 0.02 Gene family
LOC_Os02g43330 Os02g0649300 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
LOC_Os04g45810 Os04g0541700 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.02 Gene family
Solyc01g096320.3.1 Solyc01g096320.3 No description available 0.04 Gene family
Solyc08g083130.3.1 Solyc08g083130.3 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.03 Gene family
Zm00001d002799 GRMZM2G351330 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.12 Gene family
Zm00001d017422 GRMZM2G117164 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.09 Gene family
Zm00001d025964 GRMZM2G396527 27.3.22 RNA.regulation of transcription.HB,Homeobox... 0.07 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
MF GO:0043565 sequence-specific DNA binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001356 Homeobox_dom 1 39
IPR003106 Leu_zip_homeo 41 83
No external refs found!