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  5. MA_27152g0010

MA_27152g0010


Description : Protein RAE1 OS=Arabidopsis thaliana (sp|q38942|rae1_arath : 208.0)


Gene families : OG_01_0003816 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003816_tree ,
OG_02_0004359 (LandPlants) Phylogenetic Tree(s): OG_02_0004359_tree ,
OG_03_0004418 (SeedPlants) Phylogenetic Tree(s): OG_03_0004418_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_27152g0010
Cluster HCCA: Cluster_224

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00233620 evm_27.TU.AmTr_v1... Protein translocation.nucleus.nucleocytoplasmic... 0.03 Archaeplastida
Cpa|evm.model.tig00000215.115 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.02 Archaeplastida
Mp5g18210.1 No alias RAE1 scaffold nucleoporin of nuclear pore complex 0.04 Archaeplastida
Zm00001e020379_P001 No alias RAE1 scaffold nucleoporin of nuclear pore complex 0.02 Archaeplastida
AMTR_s00010p00233620 evm_27.TU.AmTr_v1... Protein translocation.nucleus.nucleocytoplasmic... 0.03 LandPlants
Gb_28486 No alias RAE1 scaffold nucleoporin of nuclear pore complex 0.02 LandPlants
Mp5g18210.1 No alias RAE1 scaffold nucleoporin of nuclear pore complex 0.04 LandPlants
Solyc10g047000.2.1 No alias RAE1 scaffold nucleoporin of nuclear pore complex 0.02 LandPlants
Zm00001e020379_P001 No alias RAE1 scaffold nucleoporin of nuclear pore complex 0.02 LandPlants
AMTR_s00010p00233620 evm_27.TU.AmTr_v1... Protein translocation.nucleus.nucleocytoplasmic... 0.03 SeedPlants
Zm00001e020379_P001 No alias RAE1 scaffold nucleoporin of nuclear pore complex 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 29 55
IPR001680 WD40_repeat 113 139
No external refs found!