GSVIVT01027118001


Description : 27.3.69 RNA.regulation of transcription.SET-domain transcriptional regulator family SET domain protein 16 (SDG16)


Gene families : OG_01_0000544 (Gene family) Phylogenetic Tree(s): OG0000544_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01027118001
Cluster HCCA cluster: Cluster_206

Target Alias Description ECC score Gene Family Method Actions
AT5G42400 SDG25, ATXR7 SET domain protein 25 0.03 Gene family
Cpa|evm.model.tig00020553.148 No alias 27.3.69 RNA.regulation of transcription.SET-domain... 0.02 Gene family
LOC_Os12g41900 Os12g0613200 27.3.69 RNA.regulation of transcription.SET-domain... 0.03 Gene family
Solyc01g006880.3.1 Solyc01g006880.3 27.3.69 RNA.regulation of transcription.SET-domain... 0.02 Gene family
Solyc01g095890.3.1 Solyc01g095890.3 27.3.69 RNA.regulation of transcription.SET-domain... 0.05 Gene family
Solyc03g083410.3.1 Solyc03g083410.3 27.3.69 RNA.regulation of transcription.SET-domain... 0.05 Gene family
Zm00001d023333 GRMZM2G473138 27.3.69 RNA.regulation of transcription.SET-domain... 0.05 Gene family
Zm00001d039355 GRMZM2G085176,... 27.3.69 RNA.regulation of transcription.SET-domain... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000313 PWWP_dom 209 306
IPR019787 Znf_PHD-finger 386 439
IPR001214 SET_dom 872 977
No external refs found!