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  5. MA_26803g0010

MA_26803g0010


Description : C3H zinc finger transcription factor


Gene families : OG_01_0001099 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001099_tree ,
OG_02_0001093 (LandPlants) Phylogenetic Tree(s): OG_02_0001093_tree ,
OG_03_0016880 (SeedPlants) Phylogenetic Tree(s): OG_03_0016880_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_26803g0010
Cluster HCCA: Cluster_446

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00149p00054910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C3H zinc... 0.04 Archaeplastida
GSVIVT01025360001 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.03 Archaeplastida
Gb_25567 No alias C3H zinc finger transcription factor 0.02 Archaeplastida
LOC_Os02g10080.1 No alias C3H zinc finger transcription factor 0.05 Archaeplastida
Solyc01g014850.4.1 No alias C3H zinc finger transcription factor 0.02 Archaeplastida
Solyc03g063200.3.1 No alias C3H zinc finger transcription factor 0.03 Archaeplastida
Zm00001e006629_P001 No alias C3H zinc finger transcription factor 0.03 Archaeplastida
Zm00001e037586_P002 No alias C3H zinc finger transcription factor 0.03 Archaeplastida
AMTR_s00022p00176740 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C3H zinc... 0.02 LandPlants
AMTR_s00149p00054910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C3H zinc... 0.04 LandPlants
Gb_25567 No alias C3H zinc finger transcription factor 0.02 LandPlants
LOC_Os02g10080.1 No alias C3H zinc finger transcription factor 0.05 LandPlants
MA_159838g0010 No alias C3H zinc finger transcription factor 0.03 LandPlants
MA_68032g0010 No alias C3H zinc finger transcription factor 0.03 LandPlants
Solyc01g014850.4.1 No alias C3H zinc finger transcription factor 0.02 LandPlants
Solyc03g063200.3.1 No alias C3H zinc finger transcription factor 0.03 LandPlants
Zm00001e006629_P001 No alias C3H zinc finger transcription factor 0.02 LandPlants
Zm00001e037586_P002 No alias C3H zinc finger transcription factor 0.02 LandPlants

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 256 282
IPR000571 Znf_CCCH 191 214
No external refs found!