GSVIVT01025562001


Description : 27.3.32 RNA.regulation of transcription.WRKY domain transcription factor family Encodes a protein similar to WRKY transcription factors that is expressed in the seed integument and endosperm. Mutants are defective in proanthocyanidin synthesis and seed mucilate deposition. Seeds are yellow colored. Seed size is also affected seeds are reduced in size but only when the mutant allele is transmitted through the female parent.Loss of function allele corresponding to the DSL QTL are associated with a reduction in interploidy lethality. TRANSPARENT TESTA GLABRA 2 (TTG2)


Gene families : OG_01_0000005 (Gene family) Phylogenetic Tree(s): OG0000005_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01025562001
Cluster HCCA cluster: Cluster_184

Target Alias Description ECC score Gene Family Method Actions
AT1G29280 ATWRKY65, WRKY65 WRKY DNA-binding protein 65 0.03 Gene family
AT1G68150 WRKY9, ATWRKY9 WRKY DNA-binding protein 9 0.04 Gene family
AT2G34830 MEE24, AtWRKY35, WRKY35 WRKY DNA-binding protein 35 0.03 Gene family
AT2G38470 WRKY33, ATWRKY33 WRKY DNA-binding protein 33 0.02 Gene family
AT3G58710 ATWRKY69, WRKY69 WRKY DNA-binding protein 69 0.03 Gene family
AT5G49520 WRKY48, ATWRKY48 WRKY DNA-binding protein 48 0.02 Gene family
GSVIVT01021397001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
GSVIVT01022067001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.04 Gene family
GSVIVT01028244001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
GSVIVT01029265001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
LOC_Os01g09100 Os01g0186000 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
LOC_Os01g47560 Os01g0665500,... 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
LOC_Os01g51690 Os01g0714800 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
LOC_Os01g53260 Os01g0734000 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
LOC_Os04g50920 Os04g0597300 27.3.32 RNA.regulation of transcription.WRKY domain... 0.04 Gene family
LOC_Os04g51560 Os04g0605100 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
LOC_Os05g40060 Os05g0478400 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
LOC_Os07g39480 Os07g0583700 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
LOC_Os11g29870 Os11g0490900 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
MA_10434976g0010 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
MA_892467g0010 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
Smo77979 PACid_15422458 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Solyc01g079360.3.1 Solyc01g079360.3 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
Solyc02g067430.3.1 Solyc02g067430.3 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
Solyc04g051690.3.1 Solyc04g051690.3 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Solyc04g056360.3.1 Solyc04g056360.3 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Solyc07g056280.3.1 Solyc07g056280.3 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
Zm00001d004086 GRMZM2G102583 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Zm00001d018656 GRMZM2G018721 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Zm00001d041958 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Zm00001d053369 GRMZM2G038158 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
MF GO:0043565 sequence-specific DNA binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003657 WRKY_dom 358 414
IPR003657 WRKY_dom 196 250
No external refs found!