GSVIVT01025041001

Description : 29.2.1.2.2.523 protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L23A Encodes a 60S ribosomal protein L23aA (AtrpL23aA). Paralog of RLPL23aB. ribosomal protein L23AA (RPL23AA)

Gene families : OG_01_0001231 (Gene family) Phylogenetic Tree(s): OG0001231_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR network (cutoff 100): GSVIVT01025041001
Cluster	HCCA cluster: Cluster_47

Target	Alias	Description	ECC score	Gene Family Method
AT2G39460	RPL23A, RPL23AA, ATRPL23A	ribosomal protein L23AA	0.06	Gene family
Cpa\|evm.model.tig00000037.39	No alias	29.2.1.2.2.523 protein.synthesis.ribosomal...	0.03	Gene family
Cre06.g282500	No alias	29.2.1.2.2.523 protein.synthesis.ribosomal...	0.05	Gene family
MA_10436962g0020	No alias	29.2.1.2.2.523 protein.synthesis.ribosomal...	0.06	Gene family
Smo271663	PACid_15402421	No description available	0.03	Gene family
Solyc02g092080.2.1	Solyc02g092080.2	29.2.1.2.2.523 protein.synthesis.ribosomal...	0.03	Gene family
Solyc09g005720.3.1	Solyc09g005720.3	29.2.1.2.2.523 protein.synthesis.ribosomal...	0.02	Gene family
Solyc10g084615.1.1	Solyc10g084615.1	29.2.1.2.2.523 protein.synthesis.ribosomal...	0.02	Gene family
Solyc10g086330.2.1	Solyc10g086330.2	29.2.1.2.2.523 protein.synthesis.ribosomal...	0.04	Gene family
Zm00001d003127	GRMZM2G083253	29.2.1.2.2.523 protein.synthesis.ribosomal...	0.04	Gene family

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	InterProScan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	InterProScan
BP	GO:0006412	translation	IEA	InterProScan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR013025	Ribosomal_L25/23	75	137
IPR005633	Ribosomal_L23/L25_N	15	65

External Links

No external refs found!

GSVIVT01025041001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation