GSVIVT01024194001


Description : 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family Encodes GATA transcription factor gene GNC, involved in regulating carbon and nitrogen metabolism. Expression occurs in aerial tissue at an early stage of development and is inducible by nitrate. GATA transcription factor 5 (GATA5)


Gene families : OG_01_0000059 (Gene family) Phylogenetic Tree(s): OG0000059_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01024194001
Cluster HCCA cluster: Cluster_167

Target Alias Description ECC score Gene Family Method Actions
AT4G26150 GATA22, CGA1, GNL cytokinin-responsive gata factor 1 0.04 Gene family
GSVIVT01018833001 No alias 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.02 Gene family
LOC_Os01g47360 Os01g0662800 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.02 Gene family
MA_103421g0030 No alias 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.02 Gene family
MA_92522g0010 No alias 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.02 Gene family
Solyc04g015360.3.1 Solyc04g015360.3 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.03 Gene family
Zm00001d018421 GRMZM2G163200 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.03 Gene family
Zm00001d051981 GRMZM2G379005 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.03 Gene family

Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
MF GO:0008270 zinc ion binding IEA InterProScan
MF GO:0043565 sequence-specific DNA binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000679 Znf_GATA 279 312
No external refs found!