GSVIVT01024119001


Description : 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein Encodes MRL1, a conserved pentatricopeptide repeat protein, required for stabilization of rbcL mRNA. MATURATION OF RBCL 1 (MRL1)


Gene families : OG_01_0004827 (Gene family) Phylogenetic Tree(s): OG0004827_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01024119001
Cluster HCCA cluster: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
AT4G34830 MRL1 Pentatricopeptide repeat (PPR) superfamily protein 0.09 Gene family
LOC_Os10g10170 Os10g0181200 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.09 Gene family
MA_10429571g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
MA_122602g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
Smo115078 PACid_15419154 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Smo169254 PACid_15423533 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
Solyc01g111020.3.1 Solyc01g111020.3 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.12 Gene family
Zm00001d030398 GRMZM2G018929,... 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.06 Gene family

Type GO Term Name Evidence Source
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002629 Met_Synth_C/arc 1 48
IPR002885 Pentatricopeptide_repeat 1207 1251
IPR033443 PPR_long 1004 1166
IPR002885 Pentatricopeptide_repeat 1175 1203
IPR002885 Pentatricopeptide_repeat 965 990
IPR003480 Transferase 71 490
No external refs found!