GSVIVT01023860001


Description : No description available


Gene families : OG_01_0000001 (Gene family) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01023860001
Cluster HCCA cluster: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
AT1G11290 CRR22 Pentatricopeptide repeat (PPR) superfamily protein 0.03 Gene family
AT1G69350 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Gene family
AT3G12770 MEF22 mitochondrial editing factor 22 0.03 Gene family
AT3G15930 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Gene family
AT4G13650 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Gene family
AT4G15720 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Gene family
AT4G18750 DOT4 Pentatricopeptide repeat (PPR) superfamily protein 0.05 Gene family
AT4G21065 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Gene family
AT5G19020 MEF18 mitochondrial editing factor 18 0.03 Gene family
AT5G27110 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Gene family
LOC_Os01g59890 Os01g0814300 35.2 not assigned.unknown Tetratricopeptide repeat... 0.03 Gene family
LOC_Os02g44480 Os02g0663900 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
LOC_Os04g43430 Os04g0514500 No description available 0.03 Gene family
LOC_Os05g30710 Os05g0370000 No description available 0.03 Gene family
MA_10429043g0020 No alias No description available 0.02 Gene family
MA_116829g0010 No alias No description available 0.03 Gene family
MA_185098g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
MA_20899g0020 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
MA_43497g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
MA_86628g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Smo81196 PACid_15406057 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
Solyc01g006920.3.1 Solyc01g006920.3 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
Solyc01g010510.3.1 Solyc01g010510.3 No description available 0.04 Gene family
Solyc01g080190.3.1 Solyc01g080190.3 No description available 0.04 Gene family
Solyc01g081560.2.1 Solyc01g081560.2 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
Solyc01g100800.2.1 Solyc01g100800.2 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
Solyc02g079380.2.1 Solyc02g079380.2 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
Solyc02g088650.1.1 Solyc02g088650.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Solyc03g025700.1.1 Solyc03g025700.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
Solyc03g063160.1.1 Solyc03g063160.1 No description available 0.04 Gene family
Solyc03g093630.2.1 Solyc03g093630.2 No description available 0.05 Gene family
Solyc03g111210.3.1 Solyc03g111210.3 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
Solyc03g116000.1.1 Solyc03g116000.1 No description available 0.04 Gene family
Solyc04g063300.2.1 Solyc04g063300.2 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.06 Gene family
Solyc04g064750.2.1 Solyc04g064750.2 No description available 0.03 Gene family
Solyc04g076330.2.1 Solyc04g076330.2 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.08 Gene family
Solyc05g012630.1.1 Solyc05g012630.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
Solyc06g062610.2.1 Solyc06g062610.2 No description available 0.08 Gene family
Solyc06g066080.1.1 Solyc06g066080.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
Solyc06g082880.2.1 Solyc06g082880.2 No description available 0.06 Gene family
Solyc07g055310.1.1 Solyc07g055310.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.08 Gene family
Solyc08g023640.1.1 Solyc08g023640.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.09 Gene family
Solyc09g010070.1.1 Solyc09g010070.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.06 Gene family
Solyc09g065710.1.1 Solyc09g065710.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.08 Gene family
Solyc11g005960.1.1 Solyc11g005960.1 No description available 0.06 Gene family
Solyc11g007230.1.1 Solyc11g007230.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Solyc11g008940.1.1 Solyc11g008940.1 No description available 0.06 Gene family
Solyc11g011860.1.1 Solyc11g011860.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Solyc11g067210.1.1 Solyc11g067210.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
Solyc11g071370.1.1 Solyc11g071370.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
Solyc12g006575.1.1 Solyc12g006575.1 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
Zm00001d003047 GRMZM2G077420 No description available 0.03 Gene family
Zm00001d037891 No alias No description available 0.04 Gene family
Zm00001d042039 GRMZM2G060536 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Zm00001d050938 GRMZM2G163396 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR032867 DYW_dom 205 329
IPR002885 Pentatricopeptide_repeat 110 156
No external refs found!