GSVIVT01023608001


Description : 34.22 transport.cyclic nucleotide or calcium regulated channels member of Cyclic nucleotide gated channel family cyclic nucleotide gated channel 5 (CNGC5)


Gene families : OG_01_0000081 (Gene family) Phylogenetic Tree(s): OG0000081_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01023608001
Cluster HCCA cluster: Cluster_135

Target Alias Description ECC score Gene Family Method Actions
AT4G30560 ATCNGC9, CNGC9 cyclic nucleotide gated channel 9 0.02 Gene family
AT5G53130 ATCNGC1, CNGC1 cyclic nucleotide gated channel 1 0.02 Gene family
Smo113786 PACid_15418666 No description available 0.02 Gene family
Smo266514 PACid_15408982 No description available 0.03 Gene family
Smo84488 PACid_15417160 No description available 0.02 Gene family
Zm00001d037035 GRMZM2G129375,... 34.22 transport.cyclic nucleotide or calcium regulated... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA InterProScan
BP GO:0006811 ion transport IEA InterProScan
CC GO:0016020 membrane IEA InterProScan
BP GO:0055085 transmembrane transport IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000595 cNMP-bd_dom 527 616
IPR005821 Ion_trans_dom 107 432
No external refs found!