GSVIVT01023271001


Description : 28.1 DNA.synthesis/chromatin structure RNA helicase family protein


Gene families : OG_01_0000624 (Gene family) Phylogenetic Tree(s): OG0000624_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01023271001
Cluster HCCA cluster: Cluster_224

Target Alias Description ECC score Gene Family Method Actions
AT1G58060 No alias RNA helicase family protein 0.07 Gene family
AT2G01130 No alias DEA(D/H)-box RNA helicase family protein 0.04 Gene family
AT5G04895 No alias DEA(D/H)-box RNA helicase family protein 0.03 Gene family
LOC_Os10g33275 Os10g0471350 28.1 DNA.synthesis/chromatin structure RNA helicase... 0.05 Gene family
MA_10437209g0010 No alias 28.1 DNA.synthesis/chromatin structure DEA(D/H)-box RNA... 0.02 Gene family
Smo173775 PACid_15417164 No description available 0.03 Gene family
Solyc01g006710.3.1 Solyc01g006710.3 28.1 DNA.synthesis/chromatin structure DEA(D/H)-box RNA... 0.05 Gene family
Solyc01g006970.3.1 Solyc01g006970.3 28.1 DNA.synthesis/chromatin structure RNA helicase... 0.03 Gene family
Zm00001d003655 GRMZM2G013283 28.1 DNA.synthesis/chromatin structure RNA helicase... 0.02 Gene family
Zm00001d032735 GRMZM2G399212 28.1 DNA.synthesis/chromatin structure RNA helicase... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan
MF GO:0005524 ATP binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001650 Helicase_C 904 1033
IPR011709 DUF1605 1289 1387
IPR007502 Helicase-assoc_dom 1098 1198
IPR011545 DEAD/DEAH_box_helicase_dom 622 785
No external refs found!