Aliases : PUB13, ATPUB13
Description : E3 ubiquitin ligase & original description: none
Gene families : OG0000092 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000092_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00001p00030110 | PUB15,... | U-box domain-containing protein 15 OS=Arabidopsis thaliana | 0.05 | OrthoFinder output from all 47 species | |
AMTR_s00007p00217990 | evm_27.TU.AmTr_v1... | U-box domain-containing protein 16 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
AMTR_s00072p00171260 | PUB14, ATPUB14,... | Protein degradation.peptide tagging.Ubiquitin... | 0.06 | OrthoFinder output from all 47 species | |
AMTR_s00086p00031680 | evm_27.TU.AmTr_v1... | U-box domain-containing protein 4 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
AT1G29340 | ATPUB17, PUB17 | plant U-box 17 | 0.06 | OrthoFinder output from all 47 species | |
AT3G46510 | PUB13, ATPUB13 | plant U-box 13 | 0.04 | OrthoFinder output from all 47 species | |
AT4G21350 | PUB8, B80 | plant U-box 8 | 0.04 | OrthoFinder output from all 47 species | |
AT5G42340 | PUB15 | Plant U-Box 15 | 0.02 | OrthoFinder output from all 47 species | |
Adi_g010019 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Adi_g017517 | ATPUB17, PUB17 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Adi_g025519 | PUB14, ATPUB14 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g026489 | No alias | E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Adi_g057743 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g057744 | PUB14, ATPUB14 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g080188 | ATPUB17, PUB17 | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Adi_g102535 | ATPUB17, PUB17 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aev_g04770 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aev_g05257 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aev_g09883 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ala_g04410 | PUB14, ATPUB14 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ala_g06664 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ala_g07408 | ATPUB17, PUB17 | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g03799 | ATPUB17, PUB17 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g07222 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Als_g16049 | ATPUB17, PUB17 | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aob_g01685 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aob_g16654 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aob_g19238 | ATPUB17, PUB17 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aop_g00484 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g19192 | ATPUB17, PUB17 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aop_g60695 | ATPUB17, PUB17 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene01129.t1 | PUB14, ATPUB14,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene36187.t1 | ATPUB17, PUB17,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene65975.t1 | PUB8, B80,... | E3 ubiquitin ligase *(PUB8) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene69641.t1 | PUB13, ATPUB13,... | E3 ubiquitin ligase *(PUB8) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0110.g045492 | ATPUB17, PUB17 | not classified & original description: CDS=1-2295 | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0579.g078276 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: CDS=173-2116 | 0.03 | OrthoFinder output from all 47 species | |
Cba_g04504 | ATPUB17, PUB17 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ceric.10G010300.1 | ATPUB17, PUB17,... | not classified & original description: pacid=50611933... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.13G074400.1 | ATPUB17, PUB17,... | E3 ubiquitin ligase & original description:... | 0.05 | OrthoFinder output from all 47 species | |
Ceric.13G093000.1 | ATPUB17, PUB17,... | not classified & original description: pacid=50635700... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.26G012900.1 | Ceric.26G012900 | not classified & original description: pacid=50598948... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.34G042900.1 | PUB13, ATPUB13,... | not classified & original description: pacid=50623547... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.35G012000.1 | PUB13, ATPUB13,... | E3 ubiquitin ligase & original description:... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.35G034600.1 | PUB18, ATPUB18,... | not classified & original description: pacid=50581001... | 0.05 | OrthoFinder output from all 47 species | |
Dac_g08066 | ATPUB17, PUB17 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dac_g12067 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dac_g12068 | No alias | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dac_g35977 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dac_g39000 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dac_g45484 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g26575 | No alias | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dde_g39767 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g06975 | ATPUB17, PUB17 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g11164 | PUB12, AtPUB12 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g22153 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01009347001 | No alias | U-box domain-containing protein 4 OS=Arabidopsis thaliana | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01016225001 | PUB14, ATPUB14 | U-box domain-containing protein 14 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01020229001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01021265001 | ATPUB17, PUB17 | U-box domain-containing protein 17 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01023893001 | PUB15 | U-box domain-containing protein 15 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
Gb_10627 | PUB8, B80 | U-box domain-containing protein 13 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
Gb_12875 | PUB13, ATPUB13 | E3 ubiquitin ligase (PUB) | 0.02 | OrthoFinder output from all 47 species | |
Gb_24091 | PUB9, ATPUB9 | U-box domain-containing protein 14 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
Gb_29129 | ATPUB17, PUB17 | U-box domain-containing protein 1 OS=Medicago truncatula... | 0.02 | OrthoFinder output from all 47 species | |
Gb_29276 | ATPUB17, PUB17 | E3 ubiquitin ligase (PUB) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os01g60860.1 | LOC_Os01g60860 | U-box domain-containing protein 16 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os01g72600.1 | LOC_Os01g72600 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os02g49950.1 | LOC_Os02g49950 | E3 ubiquitin ligase (PUB) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os03g32100.1 | LOC_Os03g32100 | U-box domain-containing protein 4 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os05g39930.1 | LOC_Os05g39930 | U-box domain-containing protein 16 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os06g01304.1 | PUB14, ATPUB14,... | E3 ubiquitin ligase (PUB) | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os06g51130.1 | PUB15, LOC_Os06g51130 | U-box domain-containing protein 15 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os08g37570.1 | PUB15, LOC_Os08g37570 | U-box domain-containing protein 15 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os12g38210.1 | PUB13, ATPUB13,... | E3 ubiquitin ligase (PUB) | 0.04 | OrthoFinder output from all 47 species | |
Len_g08149 | ATPUB17, PUB17 | E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Len_g16436 | ATPUB17, PUB17 | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g05164 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
MA_9917294g0010 | ATPUB17, PUB17 | E3 ubiquitin ligase (PUB) | 0.05 | OrthoFinder output from all 47 species | |
Msp_g01206 | ATPUB17, PUB17 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Msp_g31758 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Msp_g37725 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g03090 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g07136 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Nbi_g14682 | ATPUB45, PUB45 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ore_g07686 | PUB13, ATPUB13 | E3 ubiquitin ligase *(PUB15) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pir_g01971 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g38766 | No alias | E3 ubiquitin ligase & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Pnu_g02760 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g25353 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pnu_g30472 | PUB13, ATPUB13 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g30846 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0007.g003607 | ATPUB17, PUB17 | not classified & original description: CDS=1-2595 | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0011.g005097 | No alias | not classified & original description: CDS=1-2154 | 0.03 | OrthoFinder output from all 47 species | |
Sam_g39035 | No alias | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Smo231208 | PUB13, ATPUB13 | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
Smo420513 | No alias | U-box domain-containing protein 4 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
Solyc01g096460.2.1 | Solyc01g096460 | U-box domain-containing protein 4 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
Solyc02g072080.1.1 | ATPUB17, PUB17,... | U-box domain-containing protein 17 OS=Arabidopsis... | 0.06 | OrthoFinder output from all 47 species | |
Solyc04g077850.3.1 | Solyc04g077850 | U-box domain-containing protein 4 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
Solyc04g082440.4.1 | PUB15, Solyc04g082440 | U-box domain-containing protein 15 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
Solyc05g005670.1.1 | Solyc05g005670 | E3 ubiquitin ligase (PUB) | 0.03 | OrthoFinder output from all 47 species | |
Solyc09g018230.1.1 | Solyc09g018230 | U-box domain-containing protein 16 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
Solyc11g008390.2.1 | PUB14, ATPUB14,... | E3 ubiquitin ligase (PUB) | 0.04 | OrthoFinder output from all 47 species | |
Solyc12g088360.2.1 | Solyc12g088360 | U-box domain-containing protein 4 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
Spa_g05552 | ATPUB17, PUB17 | E3 ubiquitin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Spa_g07376 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Spa_g12131 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Spa_g18762 | ATPUB17, PUB17 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Spa_g24085 | PUB14, ATPUB14 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Spa_g25117 | PUB14, ATPUB14 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Tin_g01104 | No alias | E3 ubiquiTin ligase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Tin_g10003 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Tin_g21993 | PUB13, ATPUB13 | E3 ubiquiTin ligase *(PUB15) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Tin_g39824 | ATPUB17, PUB17 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Zm00001e013323_P001 | PUB15, Zm00001e013323 | U-box domain-containing protein 15 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e019429_P001 | Zm00001e019429 | U-box domain-containing protein 16 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e028839_P001 | Zm00001e028839 | U-box domain-containing protein 16 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000145 | exocyst | IEP | HCCA |
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
MF | GO:0003779 | actin binding | IEP | HCCA |
MF | GO:0004672 | protein kinase activity | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
MF | GO:0005543 | phospholipid binding | IEP | HCCA |
MF | GO:0005546 | phosphatidylinositol-4,5-bisphosphate binding | IEP | HCCA |
BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
BP | GO:0006644 | phospholipid metabolic process | IEP | HCCA |
BP | GO:0006650 | glycerophospholipid metabolic process | IEP | HCCA |
BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0006887 | exocytosis | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
BP | GO:0015969 | guanosine tetraphosphate metabolic process | IEP | HCCA |
MF | GO:0016301 | kinase activity | IEP | HCCA |
MF | GO:0016307 | phosphatidylinositol phosphate kinase activity | IEP | HCCA |
BP | GO:0016310 | phosphorylation | IEP | HCCA |
MF | GO:0016740 | transferase activity | IEP | HCCA |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
BP | GO:0019538 | protein metabolic process | IEP | HCCA |
BP | GO:0019637 | organophosphate metabolic process | IEP | HCCA |
MF | GO:0030246 | carbohydrate binding | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
BP | GO:0032940 | secretion by cell | IEP | HCCA |
BP | GO:0033865 | nucleoside bisphosphate metabolic process | IEP | HCCA |
BP | GO:0033875 | ribonucleoside bisphosphate metabolic process | IEP | HCCA |
BP | GO:0034032 | purine nucleoside bisphosphate metabolic process | IEP | HCCA |
BP | GO:0034035 | purine ribonucleoside bisphosphate metabolic process | IEP | HCCA |
MF | GO:0035091 | phosphatidylinositol binding | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
BP | GO:0036211 | protein modification process | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
BP | GO:0043412 | macromolecule modification | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0046486 | glycerolipid metabolic process | IEP | HCCA |
BP | GO:0046488 | phosphatidylinositol metabolic process | IEP | HCCA |
BP | GO:0046903 | secretion | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
CC | GO:0099023 | vesicle tethering complex | IEP | HCCA |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
BP | GO:0140352 | export from cell | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
MF | GO:1901981 | phosphatidylinositol phosphate binding | IEP | HCCA |
MF | GO:1902936 | phosphatidylinositol bisphosphate binding | IEP | HCCA |
No external refs found! |