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Aliases : ATRAD21.3, SYN4
Description : not classified & original description: none
Gene families : OG0001004 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001004_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00046p00010710 | SYN3, ATRAD21.2,... | Cell cycle.mitosis and meiosis.sister chromatid... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00066p00174610 | ATRAD21.3, SYN4,... | Cell cycle.mitosis and meiosis.sister chromatid... | 0.03 | OrthoFinder output from all 47 species | |
| AT5G16270 | ATRAD21.3, SYN4 | sister chromatid cohesion 1 protein 4 | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g22608 | ATRAD21.3, SYN4 | mitotic-specific Kleisin-type component *(SCC1) of... | 0.05 | OrthoFinder output from all 47 species | |
| Als_g14846 | ATRAD21.3, SYN4 | mitotic-specific Kleisin-type component *(SCC1) of... | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g16444 | ATRAD21.3, SYN4 | mitotic-specific Kleisin-type component *(SCC1) of... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g21978 | ATRAD21.3, SYN4 | mitotic-specific Kleisin-type component *(SCC1) of... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.31G015800.1 | ATRAD21.3, SYN4,... | mitotic-specific Kleisin-type component *(SCC1) of... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.39G042400.1 | ATRAD21.3, SYN4,... | not classified & original description: pacid=50582800... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01004000001 | ATRAD21.3, SYN4 | Cell cycle.mitosis and meiosis.sister chromatid... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01032038001 | SYN3, ATRAD21.2, ATSYN3 | Cell cycle.mitosis and meiosis.sister chromatid... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g49535 | ATRAD21.3, SYN4 | mitotic-specific Kleisin-type component *(SCC1) of... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g06270 | ATRAD21.3, SYN4 | mitotic-specific Kleisin-type component *(SCC1) of... | 0.03 | OrthoFinder output from all 47 species | |
| MA_10427350g0010 | ATRAD21.3, SYN4 | Sister chromatid cohesion 1 protein 4 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Mp5g04800.1 | ATRAD21.3, SYN4 | mitotic-specific Kleisin-type component SCC1 of cohesin... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g19687 | ATRAD21.3, SYN4 | mitotic-specific Kleisin-type component *(SCC1) of... | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g44962 | ATRAD21.3, SYN4 | mitotic-specific Kleisin-type component *(SCC1) of... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g34090 | ATRAD21.3, SYN4 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g41601 | ATRAD21.3, SYN4 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g62398 | ATRAD21.3, SYN4 | mitotic-specific Kleisin-type component *(SCC1) of... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0046.g013377 | ATRAD21.3, SYN4 | mitotic-specific Kleisin-type component *(SCC1) of... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g27905 | No alias | mitotic-specific Kleisin-type component *(SCC1) of... | 0.04 | OrthoFinder output from all 47 species | |
| Smo122410 | ATRAD21.3, SYN4 | Cell cycle.mitosis and meiosis.sister chromatid... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc11g008740.2.1 | ATRAD21.3, SYN4,... | mitotic-specific Kleisin-type component SCC1 of cohesin... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e018959_P001 | ATRAD21.3, SYN4,... | mitotic-specific Kleisin-type component SCC1 of cohesin... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0004180 | carboxypeptidase activity | IEP | HCCA |
| MF | GO:0004185 | serine-type carboxypeptidase activity | IEP | HCCA |
| MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| BP | GO:0006508 | proteolysis | IEP | HCCA |
| MF | GO:0008233 | peptidase activity | IEP | HCCA |
| MF | GO:0008238 | exopeptidase activity | IEP | HCCA |
| CC | GO:0016020 | membrane | IEP | HCCA |
| BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
| MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | HCCA |
| BP | GO:0030001 | metal ion transport | IEP | HCCA |
| CC | GO:0030119 | AP-type membrane coat adaptor complex | IEP | HCCA |
| CC | GO:0030131 | clathrin adaptor complex | IEP | HCCA |
| BP | GO:0040008 | regulation of growth | IEP | HCCA |
| BP | GO:0045927 | positive regulation of growth | IEP | HCCA |
| MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | HCCA |
| BP | GO:0048518 | positive regulation of biological process | IEP | HCCA |
| MF | GO:0070008 | serine-type exopeptidase activity | IEP | HCCA |
| BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
| MF | GO:0101005 | deubiquitinase activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006909 | Rad21/Rec8_C_eu | 772 | 819 |
| No external refs found! |