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  5. Ehy_g28976

Ehy_g28976


Description : putative silicon efflux transporter *(LSI2) & original description: none


Gene families : OG0000879 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000879_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g28976

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00168p00064780 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00168p00065430 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.IT... 0.02 OrthoFinder output from all 47 species
Cba_g05358 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g45721 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04848 No alias putative silicon efflux transporter *(LSI2) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01019733001 No alias Solute transport.carrier-mediated transport.IT... 0.05 OrthoFinder output from all 47 species
LOC_Os03g01700.1 LOC_Os03g01700 putative silicon efflux transporter (LSI2) 0.03 OrthoFinder output from all 47 species
LOC_Os03g05390.6 LOC_Os03g05390 putative silicon efflux transporter (LSI2) 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0065.g015985 No alias putative silicon efflux transporter *(LSI2) & original... 0.02 OrthoFinder output from all 47 species
Smo148775 No alias Solute transport.carrier-mediated transport.IT... 0.02 OrthoFinder output from all 47 species
Smo98013 No alias Solute transport.carrier-mediated transport.IT... 0.03 OrthoFinder output from all 47 species
Solyc06g036100.3.1 Solyc06g036100 putative silicon efflux transporter (LSI2) 0.02 OrthoFinder output from all 47 species
Spa_g13022 No alias putative silicon efflux transporter *(LSI2) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e000055_P001 Zm00001e000055 putative silicon efflux transporter (LSI2) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0009251 glucan catabolic process IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030245 cellulose catabolic process IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044247 cellular polysaccharide catabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0044275 cellular carbohydrate catabolic process IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051275 beta-glucan catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004680 Cit_transptr-like_dom 28 513
No external refs found!