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  5. Ehy_g28705

Ehy_g28705 (LOP1, TRN1)


Aliases : LOP1, TRN1

Description : not classified & original description: none


Gene families : OG0000350 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000350_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g28705

Target Alias Description ECC score Gene Family Method Actions
Aev_g29974 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g19733 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18237 LOP1, TRN1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g58555 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene26671.t1 LOP1, TRN1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68465.t1 LOP1, TRN1,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene68470.t1 LOP1, TRN1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0049.g030702 LOP1, TRN1 not classified & original description: CDS=40-3219 0.03 OrthoFinder output from all 47 species
Ceric.20G043500.1 LOP1, TRN1,... not classified & original description: pacid=50566189... 0.02 OrthoFinder output from all 47 species
Dac_g05356 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g06916 LOP1, TRN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g07679 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g10563 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g20878 LOP1, TRN1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dac_g28086 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g28571 LOP1, TRN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g36702 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g38470 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g10111 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g10113 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g17501 LOP1, TRN1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g26452 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g51318 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_94605g0020 LOP1, TRN1 Protein TORNADO 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp4g08770.1 No alias Protein TORNADO 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g14064 LOP1, TRN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g38222 LOP1, TRN1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g41660 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g07082 LOP1, TRN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g60220 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g42088 LOP1, TRN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g36086 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g39802 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g16496 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20985 LOP1, TRN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g29059 LOP1, TRN1 not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005985 sucrose metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016157 sucrose synthase activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
MF GO:0019888 protein phosphatase regulator activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
InterPro domains Description Start Stop
IPR006689 Small_GTPase_ARF/SAR 496 554
IPR032171 COR 680 888
No external refs found!