GSVIVT01021397001

Description : 27.3.32 RNA.regulation of transcription.WRKY domain transcription factor family member of WRKY Transcription Factor Group II-c WRKY DNA-binding protein 28 (WRKY28)

Gene families : OG_01_0000005 (Gene family) Phylogenetic Tree(s): OG0000005_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR network (cutoff 100): GSVIVT01021397001
Cluster	HCCA cluster: Cluster_106

Target	Alias	Description	ECC score	Gene Family Method
AT1G13960	WRKY4	WRKY DNA-binding protein 4	0.03	Gene family
AT1G18860	WRKY61, ATWRKY61	WRKY DNA-binding protein 61	0.02	Gene family
AT1G68150	WRKY9, ATWRKY9	WRKY DNA-binding protein 9	0.02	Gene family
AT2G38470	WRKY33, ATWRKY33	WRKY DNA-binding protein 33	0.03	Gene family
AT2G40750	WRKY54, ATWRKY54	WRKY DNA-binding protein 54	0.03	Gene family
AT2G44745	No alias	WRKY family transcription factor	0.03	Gene family
AT2G47260	WRKY23, ATWRKY23	WRKY DNA-binding protein 23	0.04	Gene family
AT3G01970	ATWRKY45, WRKY45	WRKY DNA-binding protein 45	0.04	Gene family
AT4G18170	WRKY28, ATWRKY28	WRKY DNA-binding protein 28	0.04	Gene family
AT4G31550	ATWRKY11, WRKY11	WRKY DNA-binding protein 11	0.03	Gene family
AT4G31800	WRKY18, ATWRKY18	WRKY DNA-binding protein 18	0.03	Gene family
AT4G39410	ATWRKY13, WRKY13	WRKY DNA-binding protein 13	0.03	Gene family
AT5G13080	WRKY75, ATWRKY75	WRKY DNA-binding protein 75	0.02	Gene family
AT5G24110	ATWRKY30, WRKY30	WRKY DNA-binding protein 30	0.03	Gene family
AT5G49520	WRKY48, ATWRKY48	WRKY DNA-binding protein 48	0.02	Gene family
AT5G56270	WRKY2, ATWRKY2	WRKY DNA-binding protein 2	0.02	Gene family
GSVIVT01008046001	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.04	Gene family
GSVIVT01010525001	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.04	Gene family
GSVIVT01018300001	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.05	Gene family
GSVIVT01019419001	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
GSVIVT01020060001	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
GSVIVT01025562001	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
GSVIVT01028129001	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.05	Gene family
GSVIVT01028244001	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
GSVIVT01030453001	No alias	No description available	0.04	Gene family
GSVIVT01035885001	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
LOC_Os01g09100	Os01g0186000	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
LOC_Os01g14440	Os01g0246700	No description available	0.03	Gene family
LOC_Os01g47560	Os01g0665500,...	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
LOC_Os01g51690	Os01g0714800	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
LOC_Os01g53040	Os01g0730700	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
LOC_Os01g53260	Os01g0734000	27.3.32 RNA.regulation of transcription.WRKY domain...	0.04	Gene family
LOC_Os01g54600	Os01g0750100	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
LOC_Os01g60520	Os01g0820700	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
LOC_Os02g53100	Os02g0770500	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
LOC_Os04g21950	Os04g0287400	27.3.32 RNA.regulation of transcription.WRKY domain...	0.07	Gene family
LOC_Os04g50920	Os04g0597300	27.3.32 RNA.regulation of transcription.WRKY domain...	0.04	Gene family
LOC_Os04g51560	Os04g0605100	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
LOC_Os05g27730	Os05g0343400	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
LOC_Os05g46020	Os05g0537100	27.3.32 RNA.regulation of transcription.WRKY domain...	0.04	Gene family
LOC_Os05g49100	Os05g0565900	27.3.32 RNA.regulation of transcription.WRKY domain...	0.04	Gene family
LOC_Os05g49620	Os05g0571200	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
LOC_Os09g16510	Os09g0334500	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
LOC_Os11g29870	Os11g0490900	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
MA_10432362g0010	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
MA_10432914g0010	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
MA_10434976g0010	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
MA_136551g0010	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
MA_20468g0010	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
MA_23415g0010	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
MA_88437g0010	No alias	No description available	0.02	Gene family
MA_93790g0010	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
Smo73221	PACid_15405285	No description available	0.02	Gene family
Smo77979	PACid_15422458	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
Solyc01g079260.3.1	Solyc01g079260.3	27.3.32 RNA.regulation of transcription.WRKY domain...	0.04	Gene family
Solyc01g089960.3.1	Solyc01g089960.3	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
Solyc01g095100.3.1	Solyc01g095100.3	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
Solyc01g095630.3.1	Solyc01g095630.3	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
Solyc02g032950.3.1	Solyc02g032950.3	No description available	0.04	Gene family
Solyc02g071130.3.1	Solyc02g071130.3	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
Solyc02g088345.1.1	Solyc02g088345.1	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
Solyc02g094270.2.1	Solyc02g094270.2	27.3.32 RNA.regulation of transcription.WRKY domain...	0.05	Gene family
Solyc03g116890.3.1	Solyc03g116890.3	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
Solyc04g051690.3.1	Solyc04g051690.3	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
Solyc04g078550.3.1	Solyc04g078550.3	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
Solyc05g015850.3.1	Solyc05g015850.3	27.3.32 RNA.regulation of transcription.WRKY domain...	0.05	Gene family
Solyc05g055750.3.1	Solyc05g055750.3	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
Solyc06g068460.3.1	Solyc06g068460.3	27.3.32 RNA.regulation of transcription.WRKY domain...	0.04	Gene family
Solyc07g056280.3.1	Solyc07g056280.3	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
Solyc08g006320.3.1	Solyc08g006320.3	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
Solyc08g008280.3.1	Solyc08g008280.3	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
Solyc08g067360.3.1	Solyc08g067360.3	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
Solyc08g081630.2.1	Solyc08g081630.2	27.3.32 RNA.regulation of transcription.WRKY domain...	0.04	Gene family
Solyc09g014990.3.1	Solyc09g014990.3	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
Solyc10g011910.3.1	Solyc10g011910.3	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
Solyc12g042590.2.1	Solyc12g042590.2	27.3.32 RNA.regulation of transcription.WRKY domain...	0.04	Gene family
Solyc12g096350.2.1	Solyc12g096350.2	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
Zm00001d002452	GRMZM2G024898	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
Zm00001d004086	GRMZM2G102583	27.3.32 RNA.regulation of transcription.WRKY domain...	0.04	Gene family
Zm00001d008794	GRMZM2G083350	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
Zm00001d010399	GRMZM2G449681	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
Zm00001d010617	GRMZM2G432583	27.3.32 RNA.regulation of transcription.WRKY domain...	0.05	Gene family
Zm00001d011496	GRMZM2G411766	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
Zm00001d012746	GRMZM2G013391	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
Zm00001d017712	GRMZM5G823157	27.3.32 RNA.regulation of transcription.WRKY domain...	0.05	Gene family
Zm00001d018656	GRMZM2G018721	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
Zm00001d023616	No alias	No description available	0.02	Gene family
Zm00001d026218	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
Zm00001d038023	GRMZM2G012724	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
Zm00001d038451	GRMZM2G169966	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
Zm00001d038843	GRMZM5G863420	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
Zm00001d041129	No alias	No description available	0.03	Gene family
Zm00001d043474	GRMZM2G141299	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
Zm00001d043569	GRMZM2G040298	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
Zm00001d043663	GRMZM2G101405	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
Zm00001d044010	GRMZM2G408462	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
Zm00001d044162	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
Zm00001d052847	GRMZM2G027972	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
Zm00001d053369	GRMZM2G038158	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	InterProScan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	181	238

External Links

No external refs found!

GSVIVT01021397001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation