GSVIVT01020864001

Description : 27.3.32 RNA.regulation of transcription.WRKY domain transcription factor family member of WRKY Transcription Factor Group II-c WRKY DNA-binding protein 28 (WRKY28)

Gene families : OG_01_0000005 (Gene family) Phylogenetic Tree(s): OG0000005_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR network (cutoff 100): GSVIVT01020864001
Cluster	HCCA cluster: Cluster_186

Target	Alias	Description	ECC score	Gene Family Method
AT1G18860	WRKY61, ATWRKY61	WRKY DNA-binding protein 61	0.04	Gene family
AT1G29280	ATWRKY65, WRKY65	WRKY DNA-binding protein 65	0.02	Gene family
AT1G69310	ATWRKY57, WRKY57	WRKY DNA-binding protein 57	0.03	Gene family
AT2G34830	MEE24, AtWRKY35, WRKY35	WRKY DNA-binding protein 35	0.04	Gene family
AT2G38470	WRKY33, ATWRKY33	WRKY DNA-binding protein 33	0.03	Gene family
AT2G44745	No alias	WRKY family transcription factor	0.05	Gene family
AT2G47260	WRKY23, ATWRKY23	WRKY DNA-binding protein 23	0.02	Gene family
AT3G58710	ATWRKY69, WRKY69	WRKY DNA-binding protein 69	0.04	Gene family
AT4G22070	WRKY31, ATWRKY31	WRKY DNA-binding protein 31	0.03	Gene family
AT4G31800	WRKY18, ATWRKY18	WRKY DNA-binding protein 18	0.03	Gene family
AT4G39410	ATWRKY13, WRKY13	WRKY DNA-binding protein 13	0.05	Gene family
AT5G13080	WRKY75, ATWRKY75	WRKY DNA-binding protein 75	0.02	Gene family
GSVIVT01014854001	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
GSVIVT01018300001	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
GSVIVT01022259001	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
GSVIVT01033194001	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
LOC_Os01g14440	Os01g0246700	No description available	0.02	Gene family
LOC_Os01g18584	Os01g0289600	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
LOC_Os01g60490	Os01g0820400	27.3.32 RNA.regulation of transcription.WRKY domain...	0.04	Gene family
LOC_Os01g74140	Os01g0972800	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
LOC_Os02g26430	Os02g0462800	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
LOC_Os04g21950	Os04g0287400	27.3.32 RNA.regulation of transcription.WRKY domain...	0.04	Gene family
LOC_Os04g46060	Os04g0545000	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
LOC_Os05g25770	Os05g0322900	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
LOC_Os05g40060	Os05g0478400	27.3.32 RNA.regulation of transcription.WRKY domain...	0.04	Gene family
MA_133396g0010	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
MA_179641g0010	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
MA_212937g0010	No alias	No description available	0.02	Gene family
MA_52928g0010	No alias	No description available	0.02	Gene family
MA_54954g0010	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
MA_558583g0010	No alias	No description available	0.05	Gene family
Solyc01g089960.3.1	Solyc01g089960.3	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
Solyc04g051540.3.1	Solyc04g051540.3	27.3.32 RNA.regulation of transcription.WRKY domain...	0.04	Gene family
Solyc04g051690.3.1	Solyc04g051690.3	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
Solyc05g007110.2.1	Solyc05g007110.2	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family
Solyc07g065260.3.1	Solyc07g065260.3	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
Solyc08g067360.3.1	Solyc08g067360.3	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
Solyc09g015770.3.1	Solyc09g015770.3	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
Zm00001d003331	GRMZM5G816457	27.3.32 RNA.regulation of transcription.WRKY domain...	0.04	Gene family
Zm00001d011133	GRMZM2G137802	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
Zm00001d018656	GRMZM2G018721	27.3.32 RNA.regulation of transcription.WRKY domain...	0.06	Gene family
Zm00001d023332	GRMZM2G005207	No description available	0.03	Gene family
Zm00001d026252	GRMZM2G091331	27.3.32 RNA.regulation of transcription.WRKY domain...	0.04	Gene family
Zm00001d030139	GRMZM2G383594	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
Zm00001d038451	GRMZM2G169966	27.3.32 RNA.regulation of transcription.WRKY domain...	0.03	Gene family
Zm00001d043063	GRMZM2G065290	No description available	0.04	Gene family
Zm00001d050247	No alias	27.3.32 RNA.regulation of transcription.WRKY domain...	0.02	Gene family

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	InterProScan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	173	230

External Links

No external refs found!

GSVIVT01020864001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation