GSVIVT01020854001


Description : 3.6 minor CHO metabolism.callose encodes a gene similar to callose synthase glucan synthase-like 7 (GSL07)


Gene families : OG_01_0000082 (Gene family) Phylogenetic Tree(s): OG0000082_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01020854001
Cluster HCCA cluster: Cluster_231

Target Alias Description ECC score Gene Family Method Actions
AT1G06490 GSL7, ATGSL07,... glucan synthase-like 7 0.04 Gene family
AT3G14570 GSL04, atgsl4,... glucan synthase-like 4 0.03 Gene family
GSVIVT01025370001 No alias No description available 0.02 Gene family
Smo429757 PACid_15419199 No description available 0.02 Gene family
Smo449402 PACid_15408796 No description available 0.04 Gene family
Solyc07g056260.3.1 Solyc07g056260.3 3.6 minor CHO metabolism.callose encodes a gene similar... 0.06 Gene family
Zm00001d044566 GRMZM2G022841,... 3.6 minor CHO metabolism.callose encodes a gene similar... 0.03 Gene family
Zm00001d044584 GRMZM2G465764,... 3.6 minor CHO metabolism.callose encodes a gene similar... 0.04 Gene family

Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEA InterProScan
MF GO:0003843 1,3-beta-D-glucan synthase activity IEA InterProScan
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEA InterProScan
CC GO:0016020 membrane IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR026899 FKS1-like_dom1 329 439
IPR039431 Vta1/CALS_N 44 171
IPR003440 Glyco_trans_48 1106 1710
IPR003440 Glyco_trans_48 1016 1097
No external refs found!