GSVIVT01020822001


Description : 28.1 DNA.synthesis/chromatin structure Has RNA or DNA helicase activity and expressed specifically in tapetum and vascular tissue. First identified member of a new group of the mle helicase group of the DEAH family. helicase in vascular tissue and tapetum (HVT1)


Gene families : OG_01_0007413 (Gene family) Phylogenetic Tree(s): OG0007413_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01020822001
Cluster HCCA cluster: Cluster_189

Target Alias Description ECC score Gene Family Method Actions
AT1G06670 NIH nuclear DEIH-boxhelicase 0.04 Gene family
MA_10434659g0010 No alias 28.1 DNA.synthesis/chromatin structure Has RNA or DNA... 0.03 Gene family
Smo50132 PACid_15403700 28.1 DNA.synthesis/chromatin structure Has RNA or DNA... 0.02 Gene family
Zm00001d012661 GRMZM2G037280,... 28.1 DNA.synthesis/chromatin structure Has RNA or DNA... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001374 R3H_dom 26 82
IPR011545 DEAD/DEAH_box_helicase_dom 194 343
IPR011709 DUF1605 889 977
IPR007502 Helicase-assoc_dom 729 848
IPR001650 Helicase_C 534 664
No external refs found!