GSVIVT01020805001


Description : 27.3.4 RNA.regulation of transcription.ARF, Auxin Response Factor family Encodes a member of the auxin response factor family. Mediates auxin response via expression of auxin regulated genes. Acts redundantly with ARF8 to control stamen elongation and flower maturation. Expression of ARF6 is controlled by miR167. auxin response factor 6 (ARF6)


Gene families : OG_01_0000037 (Gene family) Phylogenetic Tree(s): OG0000037_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01020805001
Cluster HCCA cluster: Cluster_135

Target Alias Description ECC score Gene Family Method Actions
AT2G33860 ARF3, ETT Transcriptional factor B3 family protein /... 0.03 Gene family
AT4G23980 ARF9 auxin response factor 9 0.04 Gene family
GSVIVT01004942001 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
LOC_Os12g29520 Os12g0479400 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
MA_566086g0010 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
Solyc12g042077.1.1 Solyc12g042077.1 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
Zm00001d014013 GRMZM2G159399 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
Zm00001d031064 GRMZM2G081158 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
Zm00001d041497 GRMZM2G073750 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
Zm00001d051172 GRMZM2G081406 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
CC GO:0005634 nucleus IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
BP GO:0009725 response to hormone IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 128 229
IPR010525 Auxin_resp 254 337
IPR033389 AUX/IAA_dom 674 762
No external refs found!