GSVIVT01020670001


Description : 27.3.52 RNA.regulation of transcription.Global transcription factor group This gene is predicted to encode a bromodomain-containing protein. Plant lines expressing RNAi constructs targeted against GTE4 show some resistance to agrobacterium-mediated root transformation. global transcription factor group E4 (GTE4)


Gene families : OG_01_0000231 (Gene family) Phylogenetic Tree(s): OG0000231_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01020670001
Cluster HCCA cluster: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
AT1G06230 GTE4 global transcription factor group E4 0.04 Gene family
AT3G27260 GTE8 global transcription factor group E8 0.02 Gene family
AT5G14270 BET9, ATBET9 bromodomain and extraterminal domain protein 9 0.03 Gene family
Cre08.g367300 No alias 27.3.52 RNA.regulation of transcription.Global... 0.02 Gene family
GSVIVT01038522001 No alias 27.3.52 RNA.regulation of transcription.Global... 0.03 Gene family
LOC_Os01g11580 Os01g0214300 27.3.52 RNA.regulation of transcription.Global... 0.08 Gene family
LOC_Os02g15220 Os02g0250300 27.3.52 RNA.regulation of transcription.Global... 0.02 Gene family
LOC_Os07g32420 Os07g0507700 27.3.52 RNA.regulation of transcription.Global... 0.03 Gene family
MA_18020g0010 No alias 27.3.52 RNA.regulation of transcription.Global... 0.1 Gene family
MA_41068g0020 No alias 27.3.52 RNA.regulation of transcription.Global... 0.02 Gene family
MA_87057g0010 No alias 27.3.52 RNA.regulation of transcription.Global... 0.06 Gene family
Solyc07g062660.3.1 Solyc07g062660.3 27.3.52 RNA.regulation of transcription.Global... 0.08 Gene family
Solyc09g090370.3.1 Solyc09g090370.3 27.3.52 RNA.regulation of transcription.Global... 0.03 Gene family
Solyc12g014170.2.1 Solyc12g014170.2 27.3.52 RNA.regulation of transcription.Global... 0.08 Gene family
Zm00001d004790 GRMZM2G169688 27.3.52 RNA.regulation of transcription.Global... 0.06 Gene family
Zm00001d016131 GRMZM2G010075 27.3.52 RNA.regulation of transcription.Global... 0.02 Gene family
Zm00001d026333 GRMZM2G396846 27.3.52 RNA.regulation of transcription.Global... 0.01 Gene family
Zm00001d053022 GRMZM2G317652 27.3.52 RNA.regulation of transcription.Global... 0.1 Gene family
Zm00001d053427 GRMZM2G004741 27.3.52 RNA.regulation of transcription.Global... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001487 Bromodomain 291 374
IPR027353 NET_dom 449 510
No external refs found!