AMTR_s00459p00011290 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00459.2

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase


Gene families : OG_01_0010112 (Archaeplastida) Phylogenetic Tree(s): OG_01_0010112_tree ,
OG_02_0010156 (LandPlants) Phylogenetic Tree(s): OG_02_0010156_tree ,
OG_03_0003084 (SeedPlants) Phylogenetic Tree(s): OG_03_0003084_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00459p00011290
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AMTR_s02101p00002550 evm_27.TU.AmTr_v1... No description available 0.04 SeedPlants
AMTR_s02587p00002560 evm_27.TU.AmTr_v1... No description available 0.05 SeedPlants
AMTR_s04277p00005890 evm_27.TU.AmTr_v1... No description available 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001841 Znf_RING 232 273
No external refs found!