Cre02.g086650


Description : 28.1 DNA.synthesis/chromatin structure SMC2-1 (SMC2) structural maintenance of chromosomes 2 (SMC2)


Gene families : OG_01_0005407 (Gene family) Phylogenetic Tree(s): OG0005407_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Cre02.g086650
Cluster HCCA cluster: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AT3G47460 ATSMC2 Structural maintenance of chromosomes (SMC) family protein 0.05 Gene family
AT5G62410 TTN3, ATSMC4,... structural maintenance of chromosomes 2 0.06 Gene family
Cpa|evm.model.tig00000615.55 No alias 28.1 DNA.synthesis/chromatin structure SMC2-1 (SMC2)... 0.06 Gene family
GSVIVT01018715001 No alias 28.1 DNA.synthesis/chromatin structure SMC2-1 (SMC2)... 0.05 Gene family
LOC_Os01g67740 Os01g0904400 28.1 DNA.synthesis/chromatin structure SMC2-1 (SMC2)... 0.02 Gene family
MA_15346g0010 No alias 28.1 DNA.synthesis/chromatin structure SMC2-1 (SMC2)... 0.05 Gene family
Smo137981 PACid_15401580 28.1 DNA.synthesis/chromatin structure SMC2-1 (SMC2)... 0.02 Gene family
Solyc03g093260.3.1 Solyc03g093260.3 28.1 DNA.synthesis/chromatin structure SMC2-1 (SMC2)... 0.1 Gene family
Zm00001d042468 GRMZM2G006452 28.1 DNA.synthesis/chromatin structure SMC2-1 (SMC2)... 0.07 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan
MF GO:0005524 ATP binding IEA InterProScan
CC GO:0005694 chromosome IEA InterProScan
BP GO:0051276 chromosome organization IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR010935 SMC_hinge 517 635
IPR003395 RecF/RecN/SMC_N 2 1156
No external refs found!