GSVIVT01020020001


Description : 29.2.1.2.1.9 protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S9 Ribosomal protein S4


Gene families : OG_01_0001466 (Gene family) Phylogenetic Tree(s): OG0001466_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01020020001
Cluster HCCA cluster: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AT5G15200 No alias Ribosomal protein S4 0.06 Gene family
Cre08.g359750 No alias 29.2.1.2.1.9 protein.synthesis.ribosomal... 0.03 Gene family
GSVIVT01008028001 No alias 29.2.1.2.1.9 protein.synthesis.ribosomal... 0.06 Gene family
LOC_Os03g05980 Os03g0154700 29.2.1.2.1.9 protein.synthesis.ribosomal... 0.04 Gene family
MA_10429805g0020 No alias 29.2.1.2.1.9 protein.synthesis.ribosomal... 0.03 Gene family
MA_10429805g0030 No alias 29.2.1.2.1.9 protein.synthesis.ribosomal... 0.01 Gene family
Smo157263 PACid_15410658 No description available 0.01 Gene family
Smo74302 PACid_15408968 No description available 0.04 Gene family
Solyc01g010540.3.1 Solyc01g010540.3 29.2.1.2.1.9 protein.synthesis.ribosomal... 0.02 Gene family
Solyc04g005680.3.1 Solyc04g005680.3 29.2.1.2.1.9 protein.synthesis.ribosomal... 0.06 Gene family
Solyc05g007250.3.1 Solyc05g007250.3 29.2.1.2.1.9 protein.synthesis.ribosomal... 0.04 Gene family
Zm00001d006924 GRMZM2G064640 29.2.1.2.1.9 protein.synthesis.ribosomal... 0.04 Gene family
Zm00001d041760 GRMZM2G108348 29.2.1.2.1.9 protein.synthesis.ribosomal... 0.04 Gene family
Zm00001d047186 GRMZM5G832108 29.2.1.2.1.9 protein.synthesis.ribosomal... 0.02 Gene family

Type GO Term Name Evidence Source
CC GO:0005622 intracellular IEA InterProScan
MF GO:0019843 rRNA binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002942 S4_RNA-bd 109 153
IPR001912 Ribosomal_S4/S9_N 12 64
No external refs found!