GSVIVT01020016001


Description : No description available


Gene families : OG_01_0000001 (Gene family) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): GSVIVT01020016001

Target Alias Description ECC score Gene Family Method Actions
AT2G27610 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Gene family
AT2G39620 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Gene family
AT3G11460 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.05 Gene family
AT5G52850 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Gene family
GSVIVT01000086001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
GSVIVT01009407001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
GSVIVT01015466001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
GSVIVT01017365001 No alias No description available 0.02 Gene family
GSVIVT01026025001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.06 Gene family
GSVIVT01026881001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
LOC_Os04g35650 Os04g0436800 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
MA_121267g0010 No alias No description available 0.02 Gene family
MA_177435g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
Solyc01g100800.2.1 Solyc01g100800.2 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Solyc02g079380.2.1 Solyc02g079380.2 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Solyc04g064750.2.1 Solyc04g064750.2 No description available 0.02 Gene family
Solyc09g009950.3.1 Solyc09g009950.3 No description available 0.02 Gene family
Zm00001d039873 GRMZM2G380195 No description available 0.02 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 355 403
IPR002885 Pentatricopeptide_repeat 254 302
IPR002885 Pentatricopeptide_repeat 166 188
IPR002885 Pentatricopeptide_repeat 195 224
IPR002885 Pentatricopeptide_repeat 93 117
IPR002885 Pentatricopeptide_repeat 430 453
No external refs found!